Tra1-TCH01A060062
|
ATGGGTTTCTTCCAAACCCTGAGTCAAACGGTTTCTCCTCCCTGAGAGCGACGCCGTTTA
GTGGGTGAGGGAGCCTTTCTCTTCCTCACCAGCTTCTTCCCACCCCTCCCCCTCCCCGTC
TAGGTAGCTTGATCCTTCGCATTGTGACTCTGTGGATGGTTGGTAGCTTTCCAGAAATTC
ACGTCTCAGTGGGGGAACGGTGGGGCCTGTTTCCGATGGCCACAGCTGTGCGGATTTCTG
CCGCAGCCTCCTGCTCGCCGTGCCTGCTCTCGTGCGTGGCAGCCGTGTAAATGTGCCTGT
TTATATGCCCGTGTGCTGTAAATGAGGGGAGACTGGACCGTTTCTTTTTCTGTCTTGCTC
TTCTCTCTCTCTTTCATCACCCCAACACACACACACACATGCATGCACGATCCTATCATT
CTAATTAGAAGATGGATATAAAGCTGTTAGGAAAAAAACCTGACTTCTGGGAATCTGATC
TGTTGGATTTATGTGACTGGGCTTGCTTCAGGGGAGACAGCCATAAATACTGCAGCGGTT
TTCCCTAAAATTGCTTTACCTTGAAATAACTCTAGGGGAGTACGGTGGCTGCCTCGTTGG
AGCCGACATTGAATACAAATCTTAATATTTCTTTTTGCCCCCTCCCCTTTTAGAGTCAGG
GACAAAAGGAAAAAAGAAACCTAGCCAGAAAACGTTAAGGTTTGACTTTGGCTTTTTTTT
TTTTTACAAATAGATGTTGCTTGTCATACTGTTGTTGTTAGGCAGGTACCAGATTGGACC
AAGTGGTGGGGGGGGTGT
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
ATGGGTTTCTTCCAAACCCTGAGTCAAACGGTTTCTCCTCCCTGAGAGCGACGCCGTTTA
GTGGGTGAGGGAGCCTTTCTCTTCCTCACCAGCTTCTTCCCACCCCTCCCCCTCCCCGTC
TAGGTAGCTTGATCCTTCGCATTGTGACTCTGTGGATGGTTGGTAGCTTTCCAGAAATTC
ACGTCTCAGTGGGGGAACGGTGGGGCCTGTTTCCGATGGCCACAGCTGTGCGGATTTCTG
CCGCAGCCTCCTGCTCGCCGTGCCTGCTCTCGTGCGTGGCAGCCGTGTAAATGTGCCTGT
TTATATGCCCGTGTGCTGTAAATGAGGGGAGACTGGACCGTTTCTTTTTCTGTCTTGCTC
TTCTCTCTCTCTTTCATCACCCCAACACACACACACACATGCATGCACGATCCTATCATT
CTAATTAGAAGATGGATATAAAGCTGTTAGGAAAAAAACCTGACTTCTGGGAATCTGATC
TGTTGGATTTATGTGACTGGGCTTGCTTCAGGGGAGACAGCCATAAATACTGCAGCGGTT
TTCCCTAAAATTGCTTTACCTTGAAATAACTCTAGGGGAGTACGGTGGCTGCCTCGTTGG
AGCCGACATTGAATACAAATCTTAATATTTCTTTTTGCCCCCTCCCCTTTTAGAGTCAGG
GACAAAAGGAAAAAAGAAACCTAGCCAGAAAACGTTAAGGTTTGACTTTGGCTTTTTTTT
TTTTTACAAATAGATGTTGCTTGTCATACTGTTGTTGTTAGGCAGGTACCAGATTGGACC
AAGTGGTGGGGGGGGTGT
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
33-332, gnl|bosTau2|chr15 (20001310-20001620) |
|
33-332, gnl|canFam2|chr5 (15045916-15045686) |
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33-332, gnl|dasNov1|scaffold_1231 (32181-32414) |
|
33-332, gnl|echTel1|scaffold_320791 (70259-70036) |
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33-332, gnl|hg17|chr11 (121535056-121535289) |
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33-332, gnl|Hg17|chr11 (121535372-121535063) |
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33-332, gnl|loxAfr1|scaffold_6112 (11500-11268) |
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33-332, gnl|mm7|chr9 (41455718-41455507) |
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33-332, gnl|Mm7|chr9 (41455437-41455711) |
|
33-332, gnl|monDom2|scaffold_2 (114799620-114799369) |
|
33-332, gnl|oryCun1|scaffold_214455 (86462-86232) |
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33-332, gnl|panTro1|chr9 (123577560-123577793) |
|
33-332, gnl|rheMac2|chr14 (120566875-120567108) |
|
33-332, gnl|rn3|chr8 (44520615-44520404) |
| |
|
341-798, gnl|bosTau2|chr15 (20001677-20002143) |
|
341-798, gnl|Hg17|chr11 (121535014-121534569) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
33-332, gnl|bosTau2|chr15 (20001310-20001620) |
|
33-332, gnl|canFam2|chr5 (15045916-15045686) |
|
33-332, gnl|dasNov1|scaffold_1231 (32181-32414) |
|
33-332, gnl|echTel1|scaffold_320791 (70259-70036) |
|
33-332, gnl|hg17|chr11 (121535056-121535289) |
|
33-332, gnl|Hg17|chr11 (121535372-121535063) |
|
33-332, gnl|loxAfr1|scaffold_6112 (11500-11268) |
|
33-332, gnl|mm7|chr9 (41455718-41455507) |
|
33-332, gnl|Mm7|chr9 (41455437-41455711) |
|
33-332, gnl|monDom2|scaffold_2 (114799620-114799369) |
|
33-332, gnl|oryCun1|scaffold_214455 (86462-86232) |
|
33-332, gnl|panTro1|chr9 (123577560-123577793) |
|
33-332, gnl|rheMac2|chr14 (120566875-120567108) |
|
33-332, gnl|rn3|chr8 (44520615-44520404) |
| |
|
341-798, gnl|bosTau2|chr15 (20001677-20002143) |
|
341-798, gnl|Hg17|chr11 (121535014-121534569) |
