Tra1-TCH01A080005
|
TGAACAGAAAAAATTTTAAGTCTTGTAAAGGCAAAGGAAGTTTATTCCTGCTACCCTTTG
AGGCCCTGCTATGTTTTCAAAAAAAATCTGTGTTAATTTTTCCACAGTTCAGTTTTGTTG
TGACCTTCTTTTTCATGCAAAAGGTCCACCCTGGAGCTGCATGCCAGCCACCAGGTGCTA
TCTGAAAAGGCTGTGATGTTTTGTCTTAGCCTAAGGGTACTCCTTATGTTGTTTTATAGT
TTTACTGCCAGATTAAGTTAAAATTTCCATTGACTCAAATATGTATATATGTACATAGCT
TAATAAGTTTGCTTCTTTACCTCGTATAACTTTGTCTCACTTTCAAGGTTTGTAAGAGTT
TCCCTAGAAATATGCAGATTCTGTCTGTGACGTCTGTCATTCTATGATCTCCACAGTTGA
TTTGGCTGGAGGAACAGTTATTTGGTAGGATATAGAAGTGGCTGGACTCTACTCGAAATA
AACTCTCAAGTTATATTTAGAGATACTATTCCCGAGTTTTGTTTTAAACCATAATATATC
TCTTAACAATATGTCAGTGTGCTGCAGCTTACCCATAATTTCCTAAGTGTTACCTTGTAT
TTATCATCCCTGGTAGTGAAAAGCTACTGGTACCTGGTGTTGGGAGGTAAACCTCAGGTA
ACCTCAGGTGTATTTTTTTTTTTTTTTGAGGCCATAATAAAGCTGGGTAAGAAAGCAAAT
TAAAGGGAAGGCCAACCTATGGACTTATAACTGAGGGCAGTATTTTCTTTTGGCTTTATT
TCTCAACCATTATGAATCTTGAATTCTAGT
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
TGAACAGAAAAAATTTTAAGTCTTGTAAAGGCAAAGGAAGTTTATTCCTGCTACCCTTTG
AGGCCCTGCTATGTTTTCAAAAAAAATCTGTGTTAATTTTTCCACAGTTCAGTTTTGTTG
TGACCTTCTTTTTCATGCAAAAGGTCCACCCTGGAGCTGCATGCCAGCCACCAGGTGCTA
TCTGAAAAGGCTGTGATGTTTTGTCTTAGCCTAAGGGTACTCCTTATGTTGTTTTATAGT
TTTACTGCCAGATTAAGTTAAAATTTCCATTGACTCAAATATGTATATATGTACATAGCT
TAATAAGTTTGCTTCTTTACCTCGTATAACTTTGTCTCACTTTCAAGGTTTGTAAGAGTT
TCCCTAGAAATATGCAGATTCTGTCTGTGACGTCTGTCATTCTATGATCTCCACAGTTGA
TTTGGCTGGAGGAACAGTTATTTGGTAGGATATAGAAGTGGCTGGACTCTACTCGAAATA
AACTCTCAAGTTATATTTAGAGATACTATTCCCGAGTTTTGTTTTAAACCATAATATATC
TCTTAACAATATGTCAGTGTGCTGCAGCTTACCCATAATTTCCTAAGTGTTACCTTGTAT
TTATCATCCCTGGTAGTGAAAAGCTACTGGTACCTGGTGTTGGGAGGTAAACCTCAGGTA
ACCTCAGGTGTATTTTTTTTTTTTTTTGAGGCCATAATAAAGCTGGGTAAGAAAGCAAAT
TAAAGGGAAGGCCAACCTATGGACTTATAACTGAGGGCAGTATTTTCTTTTGGCTTTATT
TCTCAACCATTATGAATCTTGAATTCTAGT
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
1-652, gnl|bosTau2|chr16 (44226140-44226781) |
|
1-652, gnl|Hg17|chr1 (171258903-171259552) |
| |
|
682-807, gnl|bosTau2|chr16 (44226921-44227046) |
|
682-807, gnl|canFam2|chr7 (27720219-27720031) |
|
682-807, gnl|dasNov1|scaffold_35246 (14707-14898) |
|
682-807, gnl|echTel1|scaffold_321040 (5988-5802) |
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682-807, gnl|hg17|chr1 (171259451-171259624) |
|
682-807, gnl|Hg17|chr1 (171259564-171259669) |
|
682-807, gnl|loxAfr1|scaffold_46474 (7764-7439) |
|
682-807, gnl|mm7|chr1 (160478296-160478138) |
|
682-807, gnl|panTro1|chr1 (153642430-153642603) |
|
682-807, gnl|rheMac2|chr1 (204181981-204182150) |
|
682-807, gnl|rn3|chr13 (75968121-75967969) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
1-652, gnl|bosTau2|chr16 (44226140-44226781) |
|
1-652, gnl|Hg17|chr1 (171258903-171259552) |
| |
|
682-807, gnl|bosTau2|chr16 (44226921-44227046) |
|
682-807, gnl|canFam2|chr7 (27720219-27720031) |
|
682-807, gnl|dasNov1|scaffold_35246 (14707-14898) |
|
682-807, gnl|echTel1|scaffold_321040 (5988-5802) |
|
682-807, gnl|hg17|chr1 (171259451-171259624) |
|
682-807, gnl|Hg17|chr1 (171259564-171259669) |
|
682-807, gnl|loxAfr1|scaffold_46474 (7764-7439) |
|
682-807, gnl|mm7|chr1 (160478296-160478138) |
|
682-807, gnl|panTro1|chr1 (153642430-153642603) |
|
682-807, gnl|rheMac2|chr1 (204181981-204182150) |
|
682-807, gnl|rn3|chr13 (75968121-75967969) |
