Non-Coding RNA Search

Tra1-TCH01A120029

Sequence:


               
               ATTTATGCCATAAAATTGACCAGTTTTGGGGGTAATTTTTGTTTAAGAAAGCTTTTCTTA
CCCCTAAAACTATTACATATTCTATTTCTGTTGTCTTCTTGTATATGTAATAGGATTAAC
TCCTTAGTTCATGGGAAATCCGGCTTTGTAGGATGTGAGGTATTAGGGTTTTGACAACTC
TCTTCTCCCACAAATGGGGATGTTGGCCCATCACTATTTATTGAGTGTTACAGCAGTTTC
CACACAGAGACTACTGCCTTTGCTACAATATACTAAATTATCAGATGGGCCGACTTCAAT
TTTGAACCTGCTAATGTATTTTATTCCATTTCCCTGTTTTTTATTGCTCTCATTAATGTC
ACTTCATAGATTTGATATCTTGTAAGTGAGCCCAATTGGGATAGAAGTTTGAATGAATTT
TAGAATTGGCTTGTTAAGTTAGATAACGTTGTTGGGATTTTTGATTTTCCCAAGTTAAAA
AGTATTTGTGTGTTTAAAATAATTTGTTCTAGCCTTGATCCTATATTGGTTTGCTTGGTT
GGTCTTTATACAAATCACTGTTTGAAGGCATCAGATTAGGATGTATTTCCTGTTTTCAGT
TACCATCTGTGGTTATTCATGTAGTCGTCTAAAGAAACTGACACCGGGAGTTCTTGTCGT
GGCTCATTAGAAATCagtaaccatgaggatgcaggtttgatccctggcctcattcagtgg
attaaggatctggcattgctgtgagctgtggtgtangtcgaatatgcggctcagatctgg
cattgctgt

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATTTATGCCATAAAATTGACCAGTTTTGGGGGTAATTTTTGTTTAAGAAAGCTTTTCTTA
CCCCTAAAACTATTACATATTCTATTTCTGTTGTCTTCTTGTATATGTAATAGGATTAAC
TCCTTAGTTCATGGGAAATCCGGCTTTGTAGGATGTGAGGTATTAGGGTTTTGACAACTC
TCTTCTCCCACAAATGGGGATGTTGGCCCATCACTATTTATTGAGTGTTACAGCAGTTTC
CACACAGAGACTACTGCCTTTGCTACAATATACTAAATTATCAGATGGGCCGACTTCAAT
TTTGAACCTGCTAATGTATTTTATTCCATTTCCCTGTTTTTTATTGCTCTCATTAATGTC
ACTTCATAGATTTGATATCTTGTAAGTGAGCCCAATTGGGATAGAAGTTTGAATGAATTT
TAGAATTGGCTTGTTAAGTTAGATAACGTTGTTGGGATTTTTGATTTTCCCAAGTTAAAA
AGTATTTGTGTGTTTAAAATAATTTGTTCTAGCCTTGATCCTATATTGGTTTGCTTGGTT
GGTCTTTATACAAATCACTGTTTGAAGGCATCAGATTAGGATGTATTTCCTGTTTTCAGT
TACCATCTGTGGTTATTCATGTAGTCGTCTAAAGAAACTGACACCGGGAGTTCTTGTCGT
GGCTCATTAGAAATCagtaaccatgaggatgcaggtttgatccctggcctcattcagtgg
attaaggatctggcattgctgtgagctgtggtgtangtcgaatatgcggctcagatctgg
cattgctgt

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               1-120, + strand, RNAz p=0.851382

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               1-120, + strand, RNAz p=0.851382

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-645, gnl|bosTau2|chr12 (2920263-2919610)
               

               
               1-645, gnl|Hg17|chr13 (40450232-40449673)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-645, gnl|bosTau2|chr12 (2920263-2919610)
               

               
               1-645, gnl|Hg17|chr13 (40450232-40449673)

	1-645, gnl\|bosTau2\|chr12 (2920263-2919610)
	1-645, gnl\|Hg17\|chr13 (40450232-40449673)