Non-Coding RNA Search

Tra1-TCH01B090090

Sequence:


               
               ACCTTACCTAAATTATTACACTCATTTTTTTTTAAAGTGTACATTATGAAAAAGTTATTT
TATGACTCGTAAACATTCACAGAAATCAGAACGAGCAGAGTGAAGCCCCACTCCGCTGCA
AAGCAGTGGATTCCTCTGATGAATAAATCAGAATGATTCACAATGAGTCTAATTAGCTTA
CTCGACACGTAAGCGAAGGCTTTTGCTGGGCTGGAGCAGGACCCTTGAAAAGGAGTCTAT
GTTCTGAGCTGTTTCAAACACAGCACCTCCTTCCCATTTGACTTACCTTCCTGTGTCGAC
ACTAAGTGGCCTAATTTGTGAATAAAGAGCCAATGGGTATCAACAAGACCAGCTTCAGAA
GACAGGACCTTCTTTGGTATTCACTGAGTAGGACTTTACCAAGTACGGGATGGCTTCAGA
TTCCACTTCAGGTTGGTCAAAAGTACTCTACCCTTCCGTGGTGACACCTGTGTCCCTACT
GGGCACCTCACAAACACAGGTGAGCAATCAATCACCTTCAAGATACAGGACTGGGTTTTC
TGGGCCATTAAGAGCAAGTTGACATCCGGGCACTTCAGGACTCCGCCCACTCAACTGAAC
TCCCAGGTGTCTCTTTTGCAGCAAAGGGACACCACCACTCCCAGGCAGAGTATCCTGGGT
GGCAGCCTTCTAAACATTGCCTCATGCTTCATCCCCAAGATGTAACTGTGAGCCAAGGAG
TTGTTTTATTTCATTTTGGCCACCCATGCAGCATATGGAAGTTCCTGGGCCAGGGACAGA
TTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACCTTACCTAAATTATTACACTCATTTTTTTTTAAAGTGTACATTATGAAAAAGTTATTT
TATGACTCGTAAACATTCACAGAAATCAGAACGAGCAGAGTGAAGCCCCACTCCGCTGCA
AAGCAGTGGATTCCTCTGATGAATAAATCAGAATGATTCACAATGAGTCTAATTAGCTTA
CTCGACACGTAAGCGAAGGCTTTTGCTGGGCTGGAGCAGGACCCTTGAAAAGGAGTCTAT
GTTCTGAGCTGTTTCAAACACAGCACCTCCTTCCCATTTGACTTACCTTCCTGTGTCGAC
ACTAAGTGGCCTAATTTGTGAATAAAGAGCCAATGGGTATCAACAAGACCAGCTTCAGAA
GACAGGACCTTCTTTGGTATTCACTGAGTAGGACTTTACCAAGTACGGGATGGCTTCAGA
TTCCACTTCAGGTTGGTCAAAAGTACTCTACCCTTCCGTGGTGACACCTGTGTCCCTACT
GGGCACCTCACAAACACAGGTGAGCAATCAATCACCTTCAAGATACAGGACTGGGTTTTC
TGGGCCATTAAGAGCAAGTTGACATCCGGGCACTTCAGGACTCCGCCCACTCAACTGAAC
TCCCAGGTGTCTCTTTTGCAGCAAAGGGACACCACCACTCCCAGGCAGAGTATCCTGGGT
GGCAGCCTTCTAAACATTGCCTCATGCTTCATCCCCAAGATGTAACTGTGAGCCAAGGAG
TTGTTTTATTTCATTTTGGCCACCCATGCAGCATATGGAAGTTCCTGGGCCAGGGACAGA
TTC

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               581-698, - strand, RNAz p=0.940854

Predicted RNA structure(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               581-698, - strand, RNAz p=0.940854

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

Help | Less info


               
               1-728, gnl|bosTau2|chr23 (25937497-25936779)
               

               
               1-728, gnl|Hg17|chr6 (25427591-25426876)

Aligned organism(s): 2 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-728, gnl|bosTau2|chr23 (25937497-25936779)
               

               
               1-728, gnl|Hg17|chr6 (25427591-25426876)

	1-728, gnl\|bosTau2\|chr23 (25937497-25936779)
	1-728, gnl\|Hg17\|chr6 (25427591-25426876)