Non-Coding RNA Search

Tra1-TCH01C060009

Sequence:


               
               TGGAATCCAAAATGAAATAAGGTGTTACTACCTTATTACTAGAAGAATGAATTAACTAGT
TGGTTAATGTTGAACTGAAGTATTCAATAGCCAAATCTAAGTCAGAAGAGGACGCGTTAC
CAAAGAATCTCACTGTTTCCTTCGCCTTCCTCTTTTTTTCCGACTTTCTCTGCGTCCATT
TTTATTGTCATTTATGATTGATTATAAAGAGTCTCTGTTGATTATCATGTGTCTTTATTT
GTACCAACAGTGAACAAAGTGTTTCAACAGTGTACAACAGTGGCATGGCATTTTAGTCCC
CAAACACTGGCCCTCGTGCATGGTTGTTGGAGGGAACTCAAGTGGGCATTGCTTTGTTTC
CTTTCCCAATAATTCTTTAAATGACTCATTGTAACTTAAAGTTCTTTGGAGAGCACGCAA
TTGGAGATTAAATATATGGGGGACACATCCTGTAATAATGGCATTATAGAAAGGGAAGCA
AGGGTAGCTGAGTGACCTGAGCCCTCCAGAAGTGGTTAAGAGTAACAGTGCGTGAAGGAG
CGTTCAGCGAAGGTGCGGCTGTACGTGATTACCAATTGGCCAGACTATGTAAAACGGTGC
ATGGTGTATTTCACCTGTGTGAACAGAGGGGCCACAGCGCTCATTAGAGACTCACCTGTG
GCAAATTCTCAGTCTTAGGACTGGTCGCCATCATCATCCATTGCTAACGTATGTGACAGG
CACAGTGCTTTCTATGTATCATCTCATTACTCTTCATAAATATTCCTATGACAGAGATTC
TATTATCACACCCATTAGTAAGATGGGTAAATGAAGATTAACTCAGGTTAACTAACTTCC
TTCAGGTAGCATGACATGTAATTGGTGGAGATTGGTTTTGTACCCACGCATCTGACTTCA
CAGATATGCCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGGAATCCAAAATGAAATAAGGTGTTACTACCTTATTACTAGAAGAATGAATTAACTAGT
TGGTTAATGTTGAACTGAAGTATTCAATAGCCAAATCTAAGTCAGAAGAGGACGCGTTAC
CAAAGAATCTCACTGTTTCCTTCGCCTTCCTCTTTTTTTCCGACTTTCTCTGCGTCCATT
TTTATTGTCATTTATGATTGATTATAAAGAGTCTCTGTTGATTATCATGTGTCTTTATTT
GTACCAACAGTGAACAAAGTGTTTCAACAGTGTACAACAGTGGCATGGCATTTTAGTCCC
CAAACACTGGCCCTCGTGCATGGTTGTTGGAGGGAACTCAAGTGGGCATTGCTTTGTTTC
CTTTCCCAATAATTCTTTAAATGACTCATTGTAACTTAAAGTTCTTTGGAGAGCACGCAA
TTGGAGATTAAATATATGGGGGACACATCCTGTAATAATGGCATTATAGAAAGGGAAGCA
AGGGTAGCTGAGTGACCTGAGCCCTCCAGAAGTGGTTAAGAGTAACAGTGCGTGAAGGAG
CGTTCAGCGAAGGTGCGGCTGTACGTGATTACCAATTGGCCAGACTATGTAAAACGGTGC
ATGGTGTATTTCACCTGTGTGAACAGAGGGGCCACAGCGCTCATTAGAGACTCACCTGTG
GCAAATTCTCAGTCTTAGGACTGGTCGCCATCATCATCCATTGCTAACGTATGTGACAGG
CACAGTGCTTTCTATGTATCATCTCATTACTCTTCATAAATATTCCTATGACAGAGATTC
TATTATCACACCCATTAGTAAGATGGGTAAATGAAGATTAACTCAGGTTAACTAACTTCC
TTCAGGTAGCATGACATGTAATTGGTGGAGATTGGTTTTGTACCCACGCATCTGACTTCA
CAGATATGCCC

Aligned organism(s): 9 entry(ies)

More info

Aligned organism(s): 9 entry(ies)

Help | Less info


               
               286-500, gnl|bosTau2|chr14 (27186827-27187041)
               

               
               286-500, gnl|Hg17|chr8 (119476964-119476747)
               


               
               710-911, gnl|bosTau2|chr14 (27188001-27188204)
               

               
               710-911, gnl|canFam2|chr13 (20731738-20732618)
               

               
               710-911, gnl|dasNov1|scaffold_5746 (6436-7327)
               

               
               710-911, gnl|hg17|chr8 (119475622-119476476)
               

               
               710-911, gnl|Hg17|chr8 (119476544-119476357)
               

               
               710-911, gnl|loxAfr1|scaffold_17641 (457-1307)
               

               
               710-911, gnl|panTro1|chr7 (122207205-122208062)

Aligned organism(s): 9 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               286-500, gnl|bosTau2|chr14 (27186827-27187041)
               

               
               286-500, gnl|Hg17|chr8 (119476964-119476747)
               


               
               710-911, gnl|bosTau2|chr14 (27188001-27188204)
               

               
               710-911, gnl|canFam2|chr13 (20731738-20732618)
               

               
               710-911, gnl|dasNov1|scaffold_5746 (6436-7327)
               

               
               710-911, gnl|hg17|chr8 (119475622-119476476)
               

               
               710-911, gnl|Hg17|chr8 (119476544-119476357)
               

               
               710-911, gnl|loxAfr1|scaffold_17641 (457-1307)
               

               
               710-911, gnl|panTro1|chr7 (122207205-122208062)

	286-500, gnl\|bosTau2\|chr14 (27186827-27187041)
	286-500, gnl\|Hg17\|chr8 (119476964-119476747)

	710-911, gnl\|bosTau2\|chr14 (27188001-27188204)
	710-911, gnl\|canFam2\|chr13 (20731738-20732618)
	710-911, gnl\|dasNov1\|scaffold_5746 (6436-7327)
	710-911, gnl\|hg17\|chr8 (119475622-119476476)
	710-911, gnl\|Hg17\|chr8 (119476544-119476357)
	710-911, gnl\|loxAfr1\|scaffold_17641 (457-1307)
	710-911, gnl\|panTro1\|chr7 (122207205-122208062)