Tra1-TCH01C060044
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| ATGCCTGTGAGACAATGGGCAATGCCACAGCCATTTGCTCTGATAAGACAGGCACCTTGA CCATGAACCGCATGACTGTGGTACAGGCTTATATTGGAGACACCCGTTACCATCAGATCC CAAGCCCTGATGTCCTCGTGCCCAAGGTCCTGGACCTTATTGTCAATGGCATTTCTATCA ACAGTGCCTATACGTCCAAGATTCTGCCTCCAGAGAAGGAGGGCGGCCTGCCTCGGCAGG TGGGCAACAAAACCGAGTGTGCTCTGCTGGGCTTTGTCACGGACCTGAAGCAGGATTACC ACGCCGTGCGTAGCGAGGTGCCGGAGGAGAAGCTCTACAAGGTGTACACCTTCAACTCCG TGCGCAAGTCCATGAGCACCGTCATCGAGAAGCCCGGCGGCGGCTACCGCATGTACAGCA AGGGTGCTTCTGAGATCATCTTGCGCAAGTGAGTGCCCTTCCCCCACTTCTTCTTTCCGA CAGGATCCTCCCCTCGGGAAGGTCTGGGTGCTATGGCCCACGCTGAATCCACCTGGATGA TGAACGAGCCCTGCTTCCAGGTGGTGACCTCAGGACTAACCTCTGAGCATTCATCCAGGC CAAGTTCAGTACCTTGGACGGCTGACTGTCTTTATTCTTCACAATACAATTAGATGGATG CTGTCCTTACCCCCGTTTTACAGATGAGAAAACAGAGGGGCAGGAAAGTTAAGGAATTTG CTGAAGGTGGTACAGCTAGCAGTGGCCCAGCCAATATTCAGACTTAGGCAATCTAAGCTT CCATTTTCT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| ATGCCTGTGAGACAATGGGCAATGCCACAGCCATTTGCTCTGATAAGACAGGCACCTTGA CCATGAACCGCATGACTGTGGTACAGGCTTATATTGGAGACACCCGTTACCATCAGATCC CAAGCCCTGATGTCCTCGTGCCCAAGGTCCTGGACCTTATTGTCAATGGCATTTCTATCA ACAGTGCCTATACGTCCAAGATTCTGCCTCCAGAGAAGGAGGGCGGCCTGCCTCGGCAGG TGGGCAACAAAACCGAGTGTGCTCTGCTGGGCTTTGTCACGGACCTGAAGCAGGATTACC ACGCCGTGCGTAGCGAGGTGCCGGAGGAGAAGCTCTACAAGGTGTACACCTTCAACTCCG TGCGCAAGTCCATGAGCACCGTCATCGAGAAGCCCGGCGGCGGCTACCGCATGTACAGCA AGGGTGCTTCTGAGATCATCTTGCGCAAGTGAGTGCCCTTCCCCCACTTCTTCTTTCCGA CAGGATCCTCCCCTCGGGAAGGTCTGGGTGCTATGGCCCACGCTGAATCCACCTGGATGA TGAACGAGCCCTGCTTCCAGGTGGTGACCTCAGGACTAACCTCTGAGCATTCATCCAGGC CAAGTTCAGTACCTTGGACGGCTGACTGTCTTTATTCTTCACAATACAATTAGATGGATG CTGTCCTTACCCCCGTTTTACAGATGAGAAAACAGAGGGGCAGGAAAGTTAAGGAATTTG CTGAAGGTGGTACAGCTAGCAGTGGCCCAGCCAATATTCAGACTTAGGCAATCTAAGCTT CCATTTTCT |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 206-324, + strand, RNAz p=0.752772 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 206-324, + strand, RNAz p=0.752772 |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 1-202, gnl|bosTau2|chr5 (12469989-12470190) | |
| 1-202, gnl|canFam2|chr15 (33592799-33593049) | |
| 1-202, gnl|danRer3|chr4 (15964835-15964586) | |
| 1-202, gnl|dasNov1|scaffold_3313 (83443-83692) | |
| 1-202, gnl|echTel1|scaffold_214494 (4349-4099) | |
| 1-202, gnl|fr1|chrUn (75931449-75931694) | |
| 1-202, gnl|galGal2|chr1 (40202155-40202403) | |
| 1-202, gnl|hg17|chr12 (88517788-88518038) | |
| 1-202, gnl|Hg17|chr12 (88517999-88517798) | |
| 1-202, gnl|loxAfr1|scaffold_3228 (52248-52498) | |
| 1-202, gnl|mm7|chr10 (98562477-98562227) | |
| 1-202, gnl|Mm7|chr10 (98562264-98562465) | |
| 1-202, gnl|monDom2|scaffold_34 (27457911-27457661) | |
| 1-202, gnl|oryCun1|scaffold_202263 (71259-71016) | |
| 1-202, gnl|panTro1|chr10 (90644830-90645080) | |
| 1-202, gnl|rheMac2|chr11 (90774110-90774360) | |
| 1-202, gnl|rn3|chr7 (36598715-36598465) | |
| 1-202, gnl|tetNig1|chr19 (2554730-2554482) | |
| 1-202, gnl|xenTro1|scaffold_237 (519346-519098) | |
| 206-789, gnl|bosTau2|chr16 (2864233-2864806) | |
| 206-789, gnl|Hg17|chr1 (200410085-200410671) | |
| 206-789, gnl|Mm7|chr1 (133620396-133619826) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-202, gnl|bosTau2|chr5 (12469989-12470190) | |
| 1-202, gnl|canFam2|chr15 (33592799-33593049) | |
| 1-202, gnl|danRer3|chr4 (15964835-15964586) | |
| 1-202, gnl|dasNov1|scaffold_3313 (83443-83692) | |
| 1-202, gnl|echTel1|scaffold_214494 (4349-4099) | |
| 1-202, gnl|fr1|chrUn (75931449-75931694) | |
| 1-202, gnl|galGal2|chr1 (40202155-40202403) | |
| 1-202, gnl|hg17|chr12 (88517788-88518038) | |
| 1-202, gnl|Hg17|chr12 (88517999-88517798) | |
| 1-202, gnl|loxAfr1|scaffold_3228 (52248-52498) | |
| 1-202, gnl|mm7|chr10 (98562477-98562227) | |
| 1-202, gnl|Mm7|chr10 (98562264-98562465) | |
| 1-202, gnl|monDom2|scaffold_34 (27457911-27457661) | |
| 1-202, gnl|oryCun1|scaffold_202263 (71259-71016) | |
| 1-202, gnl|panTro1|chr10 (90644830-90645080) | |
| 1-202, gnl|rheMac2|chr11 (90774110-90774360) | |
| 1-202, gnl|rn3|chr7 (36598715-36598465) | |
| 1-202, gnl|tetNig1|chr19 (2554730-2554482) | |
| 1-202, gnl|xenTro1|scaffold_237 (519346-519098) | |
| 206-789, gnl|bosTau2|chr16 (2864233-2864806) | |
| 206-789, gnl|Hg17|chr1 (200410085-200410671) | |
| 206-789, gnl|Mm7|chr1 (133620396-133619826) |