Tra1-TCH01C120066
|
GTTTATAAAGCATTGAAAATATATTGCTTTAGGAAATAGCCAGAGTGCCAGAGTCTCTTT
GCTGCTTGAGAGAATCAGAAATCTTTGGCCTTTAGCTTCGTTCAGAACTTTGAAAGAACT
TAAAGATAATTCATGAGTTTAGGAAACATTTTAATACCATAAAATACTGGTTATCTGGAG
TCCAGAGGAATGAATCATAGTGGTTATGGTATCAAAGACTGAAGGAGTATTTTCCCAAGG
TGATTTTCCACACTCCTGAAAATCATCATTCTCACAATAATCTGTGTCTTTTGGCTTGTC
AGCACTTTGAAAACATAAGACTTTTTTTCCAAGTCACAAAACCCTCTTTGGCTCTTCTCA
CCTATGTTTCTGTCTTGTTGATGGGGTATGAAGGACTATGCTTCACCATTACAAGAATGT
GTGCTTTAGGAATTTGGGGAGTGCTTTCTCACAAAAAATTGTGTTTTGTGTGTGTATGTG
TGTGTAATCATGGGAGAGAAGCACAGCTCTGCAAACATGAAGCTGGCTGCAGTTTTCTCC
AGCTCTTTTTTGGTGCTTCGACCAGAACCACAGAGAAAAGTTGACAAACGTTGCCTTGAT
TGACTGACTTTGTAAGTGTTGTAAACTGTTCCAAGGGCCCACTGCATTCTAGCAGGGTAT
TTTCCAGAAATCTCAACAGTTTTTTTTTTTTTTTTCCCCTTTCTAGCTTGAGGTTACGCT
GAATTCTTTTGCAACTTGCTCTGATGTTTTCATGCCTTATTT
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GTTTATAAAGCATTGAAAATATATTGCTTTAGGAAATAGCCAGAGTGCCAGAGTCTCTTT
GCTGCTTGAGAGAATCAGAAATCTTTGGCCTTTAGCTTCGTTCAGAACTTTGAAAGAACT
TAAAGATAATTCATGAGTTTAGGAAACATTTTAATACCATAAAATACTGGTTATCTGGAG
TCCAGAGGAATGAATCATAGTGGTTATGGTATCAAAGACTGAAGGAGTATTTTCCCAAGG
TGATTTTCCACACTCCTGAAAATCATCATTCTCACAATAATCTGTGTCTTTTGGCTTGTC
AGCACTTTGAAAACATAAGACTTTTTTTCCAAGTCACAAAACCCTCTTTGGCTCTTCTCA
CCTATGTTTCTGTCTTGTTGATGGGGTATGAAGGACTATGCTTCACCATTACAAGAATGT
GTGCTTTAGGAATTTGGGGAGTGCTTTCTCACAAAAAATTGTGTTTTGTGTGTGTATGTG
TGTGTAATCATGGGAGAGAAGCACAGCTCTGCAAACATGAAGCTGGCTGCAGTTTTCTCC
AGCTCTTTTTTGGTGCTTCGACCAGAACCACAGAGAAAAGTTGACAAACGTTGCCTTGAT
TGACTGACTTTGTAAGTGTTGTAAACTGTTCCAAGGGCCCACTGCATTCTAGCAGGGTAT
TTTCCAGAAATCTCAACAGTTTTTTTTTTTTTTTTCCCCTTTCTAGCTTGAGGTTACGCT
GAATTCTTTTGCAACTTGCTCTGATGTTTTCATGCCTTATTT
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
28-762, gnl|bosTau2|chr28 (10911911-10911173) |
|
28-762, gnl|canFam2|chr4 (14055423-14055909) |
|
28-762, gnl|dasNov1|scaffold_5505 (46735-46266) |
|
28-762, gnl|echTel1|scaffold_283101 (9677-9262) |
|
28-762, gnl|hg17|chr10 (60077094-60077562) |
|
28-762, gnl|Hg17|chr10 (60077097-60077826) |
|
28-762, gnl|loxAfr1|scaffold_6195 (44550-44991) |
|
28-762, gnl|oryCun1|scaffold_148846 (4832-5323) |
|
28-762, gnl|panTro1|chr8_random (35181492-35181025) |
|
28-762, gnl|rheMac2|chr9 (78657347-78656872) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
28-762, gnl|bosTau2|chr28 (10911911-10911173) |
|
28-762, gnl|canFam2|chr4 (14055423-14055909) |
|
28-762, gnl|dasNov1|scaffold_5505 (46735-46266) |
|
28-762, gnl|echTel1|scaffold_283101 (9677-9262) |
|
28-762, gnl|hg17|chr10 (60077094-60077562) |
|
28-762, gnl|Hg17|chr10 (60077097-60077826) |
|
28-762, gnl|loxAfr1|scaffold_6195 (44550-44991) |
|
28-762, gnl|oryCun1|scaffold_148846 (4832-5323) |
|
28-762, gnl|panTro1|chr8_random (35181492-35181025) |
|
28-762, gnl|rheMac2|chr9 (78657347-78656872) |
