Non-Coding RNA Search

Tra1-TCH01D020008

Sequence:


               
               TGAGGATGGAAGGCTTTTTTGCTAAGGAAAGTAGACAACCAGGTTACTGATGCCTATGGA
GGCTCCATGTCAGCCTTGGATTGCCTGTCTTAGGACATCTGTGGGAGAGAAAAATACCGA
TCAGTATCCCTGAGGGAAGGGAGGAGTAGGCGAAGTCCAAGAAATAGCTGCAGGCTGGTT
GCCCGCTGGGGAGGCAGGACCCCGTGGGCCCAGGACTGCGCATGGCGGGGAAGGCACATC
CCCGCAGCCTCGTGGCAAGCCTTCCAGACCTGTCTGCAGCTCTTCCTGTGACCAAGAGGC
CTTTTCCTGTGTTTGAACTCACCACCAATGGCTGTACTACCAAAGGCTGCCTGCTATTCA
CCGACAGCTGCTTTGAACATCAGTCAGATCAGGTCATCTGCCAAGCTGTGTGCCTCTGGT
CATATCGCTCTGAGGCCTCCGGTTTGTCAGCTTCAAAGTACCTCACAAGTGGCGACTTGC
CTCCTTCGGGGTGAATGTTAAAAGAAGAGGAAGCCTGGACAGACTCATGACCCCACTGGA
ATTAAGGCTGAGAGCTTCCATCTCATTTTGCAAAAGAAGAAATCAGCACCAAAGAAGAGC
AGTGAAAACTACTGCCAGGCCTTGTGGCCAGATCTTAGGGTGCTTGGAGAGCACCTGTAA
GTGGAAGAAAAGGCCTTCACAACCACTCTGGAGGAAGACTGGAAAATGGAGCCCTGCTGA
ATAATGGAAGTGAGTACTGGAGGAGGATGCTTGCTCACCTGGCCTGACGATAAACCTACA
GGATCAAGTTCAGAATCTGAATGTGGACCTCCCAGCTGCCCTTTGCAGGAGCTGCTGCCT
CCCCATCTTTGCCTGGCATATGCCTGCTCCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGAGGATGGAAGGCTTTTTTGCTAAGGAAAGTAGACAACCAGGTTACTGATGCCTATGGA
GGCTCCATGTCAGCCTTGGATTGCCTGTCTTAGGACATCTGTGGGAGAGAAAAATACCGA
TCAGTATCCCTGAGGGAAGGGAGGAGTAGGCGAAGTCCAAGAAATAGCTGCAGGCTGGTT
GCCCGCTGGGGAGGCAGGACCCCGTGGGCCCAGGACTGCGCATGGCGGGGAAGGCACATC
CCCGCAGCCTCGTGGCAAGCCTTCCAGACCTGTCTGCAGCTCTTCCTGTGACCAAGAGGC
CTTTTCCTGTGTTTGAACTCACCACCAATGGCTGTACTACCAAAGGCTGCCTGCTATTCA
CCGACAGCTGCTTTGAACATCAGTCAGATCAGGTCATCTGCCAAGCTGTGTGCCTCTGGT
CATATCGCTCTGAGGCCTCCGGTTTGTCAGCTTCAAAGTACCTCACAAGTGGCGACTTGC
CTCCTTCGGGGTGAATGTTAAAAGAAGAGGAAGCCTGGACAGACTCATGACCCCACTGGA
ATTAAGGCTGAGAGCTTCCATCTCATTTTGCAAAAGAAGAAATCAGCACCAAAGAAGAGC
AGTGAAAACTACTGCCAGGCCTTGTGGCCAGATCTTAGGGTGCTTGGAGAGCACCTGTAA
GTGGAAGAAAAGGCCTTCACAACCACTCTGGAGGAAGACTGGAAAATGGAGCCCTGCTGA
ATAATGGAAGTGAGTACTGGAGGAGGATGCTTGCTCACCTGGCCTGACGATAAACCTACA
GGATCAAGTTCAGAATCTGAATGTGGACCTCCCAGCTGCCCTTTGCAGGAGCTGCTGCCT
CCCCATCTTTGCCTGGCATATGCCTGCTCCT

Aligned organism(s): 6 entry(ies)

More info

Aligned organism(s): 6 entry(ies)

Help | Less info


               
               129-346, gnl|bosTau2|chr20 (6751785-6751564)
               

               
               129-346, gnl|Hg17|chr5 (71850292-71850082)
               

               
               129-346, gnl|Mm7|chr13 (96244612-96244829)
               


               
               349-631, gnl|bosTau2|chr20 (6751327-6751048)
               

               
               349-631, gnl|Hg17|chr5 (71849846-71849561)
               

               
               349-631, gnl|Mm7|chr13 (96245057-96245308)

Aligned organism(s): 6 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               129-346, gnl|bosTau2|chr20 (6751785-6751564)
               

               
               129-346, gnl|Hg17|chr5 (71850292-71850082)
               

               
               129-346, gnl|Mm7|chr13 (96244612-96244829)
               


               
               349-631, gnl|bosTau2|chr20 (6751327-6751048)
               

               
               349-631, gnl|Hg17|chr5 (71849846-71849561)
               

               
               349-631, gnl|Mm7|chr13 (96245057-96245308)

	129-346, gnl\|bosTau2\|chr20 (6751785-6751564)
	129-346, gnl\|Hg17\|chr5 (71850292-71850082)
	129-346, gnl\|Mm7\|chr13 (96244612-96244829)

	349-631, gnl\|bosTau2\|chr20 (6751327-6751048)
	349-631, gnl\|Hg17\|chr5 (71849846-71849561)
	349-631, gnl\|Mm7\|chr13 (96245057-96245308)