Tra1-TCH01D100040
               |  | ACTTTAAAATTGAAAGAAAAAAAAATCTAGAAGCAGGGAGATGTGGTTGGATTCTGATAA
TCATTACTTTGCAGAAGAGGTTGAGTATTTTTCCATTTCAACAAGTCATTAGAAGTGGAA
AACTCATTGGAATACAGATATACAGTCCATAAACAGAGCAAGGTAATGAAAATTATCCTG
ATTATTCACAAGCCAACTGGTGACAAGGATGATGTGCAGCCCCAATTTCCTGCAAATGGT
TTGTAGTGCTCTTTTTGTAAAAAGAAAAATGAGTCTGACTCAATTCTTTTGTATTTTACT
TTCCTTTTTATCATGCTAGGGAAAATGTCATATTTTATGTCAGATGTAACCAGATAATTG
GAGTTTTGACAAGCTTTTGCTTTGTTCTAGAGAACCAATCCTGTAACTATATTTCCTCTT
GCCTTAACTCTTTGTGACTTCCTCCTCCTCTTCCCAGGATGGAAATCTCGCTTTTGGATT
TCACCTGAATGCCTGGATTCTCCTACCACCTGTTAGTCGATATCCCAGGTGTTTTCTGAA
TCCCTAGGTTTCTCAGAATGTCTGTCTTGGATCCTTCATCTCTGTCTGTCACCCAAGTAC
TTGTCCATTCCCACTCTTAAAGTTTGGCTCTTTCTGAAAGGAACTGTTTGCCCAGACTAC
CCCCAATTTTCTG | 
Blue-coloured subsequences are predicted RNA structures by RNAz
               |  | ACTTTAAAATTGAAAGAAAAAAAAATCTAGAAGCAGGGAGATGTGGTTGGATTCTGATAA
TCATTACTTTGCAGAAGAGGTTGAGTATTTTTCCATTTCAACAAGTCATTAGAAGTGGAA
AACTCATTGGAATACAGATATACAGTCCATAAACAGAGCAAGGTAATGAAAATTATCCTG
ATTATTCACAAGCCAACTGGTGACAAGGATGATGTGCAGCCCCAATTTCCTGCAAATGGT
TTGTAGTGCTCTTTTTGTAAAAAGAAAAATGAGTCTGACTCAATTCTTTTGTATTTTACT
TTCCTTTTTATCATGCTAGGGAAAATGTCATATTTTATGTCAGATGTAACCAGATAATTG
GAGTTTTGACAAGCTTTTGCTTTGTTCTAGAGAACCAATCCTGTAACTATATTTCCTCTT
GCCTTAACTCTTTGTGACTTCCTCCTCCTCTTCCCAGGATGGAAATCTCGCTTTTGGATT
TCACCTGAATGCCTGGATTCTCCTACCACCTGTTAGTCGATATCCCAGGTGTTTTCTGAA
TCCCTAGGTTTCTCAGAATGTCTGTCTTGGATCCTTCATCTCTGTCTGTCACCCAAGTAC
TTGTCCATTCCCACTCTTAAAGTTTGGCTCTTTCTGAAAGGAACTGTTTGCCCAGACTAC
CCCCAATTTTCTG | 
               |  | 3-179, gnl|bosTau2|chr6 (2710142-2709963) | 
               |  | 3-179, gnl|Hg17|chr4 (120257454-120257240) | 
| 
 |  | 
               |  | 225-364, gnl|bosTau2|chr6 (2709969-2709826) | 
               |  | 225-364, gnl|canFam2|chr32 (40861987-40862264) | 
               |  | 225-364, gnl|hg17|chr4 (120256977-120257254) | 
               |  | 225-364, gnl|Hg17|chr4 (120257299-120257108) | 
               |  | 225-364, gnl|loxAfr1|scaffold_10890 (49229-48946) | 
               |  | 225-364, gnl|panTro1|chr3 (136861163-136861440) | 
               |  | 225-364, gnl|rheMac2|chr5 (111573154-111573431) | 
| 
 |  | 
               |  | 430-673, gnl|bosTau2|chr6 (2708461-2708229) | 
               |  | 430-673, gnl|Hg17|chr4 (120254338-120254099) | 
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
               |  | 3-179, gnl|bosTau2|chr6 (2710142-2709963) | 
               |  | 3-179, gnl|Hg17|chr4 (120257454-120257240) | 
| 
 |  | 
               |  | 225-364, gnl|bosTau2|chr6 (2709969-2709826) | 
               |  | 225-364, gnl|canFam2|chr32 (40861987-40862264) | 
               |  | 225-364, gnl|hg17|chr4 (120256977-120257254) | 
               |  | 225-364, gnl|Hg17|chr4 (120257299-120257108) | 
               |  | 225-364, gnl|loxAfr1|scaffold_10890 (49229-48946) | 
               |  | 225-364, gnl|panTro1|chr3 (136861163-136861440) | 
               |  | 225-364, gnl|rheMac2|chr5 (111573154-111573431) | 
| 
 |  | 
               |  | 430-673, gnl|bosTau2|chr6 (2708461-2708229) | 
               |  | 430-673, gnl|Hg17|chr4 (120254338-120254099) |