Non-Coding RNA Search

Tra1-TCH01D100042

Sequence:


               
               AAATGCAGGAAAGGCCTGGGAATGAATACCGGCCTTCTGGAAATGCTATTTTTTCACTTT
GGGATAACTCCAGTAACCAAGCAGAATTTTCTGATGCATTTGCCAAATAAAAGAGCTGAG
GTTGAGAACTAGCATGAGATATTTTAGCTTAATGTACATTTTGGAGAGCCGGATAAGAAA
AGCCAGCTCTAAATATAAATACAAAAGTTACATCTTGACTCTTGCCATGGAATCATGTTG
TCACTTCCTCATAGAAGCAAAAACATTTTAACATTCACCATGAATCTAATTCATTGGCAT
TACTTGTTTACCCTAAAGAGAGTTTAAAAAAAAAAATCACCAGGCCCCCAGATGTTGCAT
TGGCCCCAACCATGTTCATATTCTGCTGCCTTCGCCTTTCTTTCCATCTTTCTCACACCG
CCTCCTCTTCGTAGTAAGAAAAATAAAGCAGCTGCAAAATGAAACTATATGTGAAGCCTC
TCTGCAGTAGGTGCATCTAAAAGCCACTTTTAAGGTAGAAAGGCGTGTGGTCTGGCTACG
TTTGGATTCATGCTGTTCCTTAGTCCTTACCTAGTTTTCTTCTTTGTAACCTACTCCTGC
CATTCCTGCCCCCACGCTCCAGTCCCCTTCCCATCACTTCTGAATAAACGGTGAGACATC
TGGCAAATGTTTTAATGGAAAAGAATAAGAGGATATCCATTTTATGGTACCCAGATAATT
GTTCTTGATCTTTCTTTTATCAAAACACGTTACCCGGATTTCATTGGTGGTATAGTGGGT
TAAGACTCTGGCATGGTCACTGTTGTGACTGGTTGCTGCTGTGGTCTGGGTGCAGTGGGT
TAAGGATCCATGTGCTGAGGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAATGCAGGAAAGGCCTGGGAATGAATACCGGCCTTCTGGAAATGCTATTTTTTCACTTT
GGGATAACTCCAGTAACCAAGCAGAATTTTCTGATGCATTTGCCAAATAAAAGAGCTGAG
GTTGAGAACTAGCATGAGATATTTTAGCTTAATGTACATTTTGGAGAGCCGGATAAGAAA
AGCCAGCTCTAAATATAAATACAAAAGTTACATCTTGACTCTTGCCATGGAATCATGTTG
TCACTTCCTCATAGAAGCAAAAACATTTTAACATTCACCATGAATCTAATTCATTGGCAT
TACTTGTTTACCCTAAAGAGAGTTTAAAAAAAAAAATCACCAGGCCCCCAGATGTTGCAT
TGGCCCCAACCATGTTCATATTCTGCTGCCTTCGCCTTTCTTTCCATCTTTCTCACACCG
CCTCCTCTTCGTAGTAAGAAAAATAAAGCAGCTGCAAAATGAAACTATATGTGAAGCCTC
TCTGCAGTAGGTGCATCTAAAAGCCACTTTTAAGGTAGAAAGGCGTGTGGTCTGGCTACG
TTTGGATTCATGCTGTTCCTTAGTCCTTACCTAGTTTTCTTCTTTGTAACCTACTCCTGC
CATTCCTGCCCCCACGCTCCAGTCCCCTTCCCATCACTTCTGAATAAACGGTGAGACATC
TGGCAAATGTTTTAATGGAAAAGAATAAGAGGATATCCATTTTATGGTACCCAGATAATT
GTTCTTGATCTTTCTTTTATCAAAACACGTTACCCGGATTTCATTGGTGGTATAGTGGGT
TAAGACTCTGGCATGGTCACTGTTGTGACTGGTTGCTGCTGTGGTCTGGGTGCAGTGGGT
TAAGGATCCATGTGCTGAGGG

Aligned organism(s): 5 entry(ies)

More info

Aligned organism(s): 5 entry(ies)

Help | Less info


               
               1-496, gnl|bosTau2|chr10 (58532159-58532629)
               

               
               1-496, gnl|Hg17|chr14 (71231801-71232285)
               

               
               1-496, gnl|Mm7|chr12 (80405229-80405641)
               


               
               560-685, gnl|bosTau2|chr10 (58532895-58533018)
               

               
               560-685, gnl|Hg17|chr14 (71232324-71232479)

Aligned organism(s): 5 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-496, gnl|bosTau2|chr10 (58532159-58532629)
               

               
               1-496, gnl|Hg17|chr14 (71231801-71232285)
               

               
               1-496, gnl|Mm7|chr12 (80405229-80405641)
               


               
               560-685, gnl|bosTau2|chr10 (58532895-58533018)
               

               
               560-685, gnl|Hg17|chr14 (71232324-71232479)

	1-496, gnl\|bosTau2\|chr10 (58532159-58532629)
	1-496, gnl\|Hg17\|chr14 (71231801-71232285)
	1-496, gnl\|Mm7\|chr12 (80405229-80405641)

	560-685, gnl\|bosTau2\|chr10 (58532895-58533018)
	560-685, gnl\|Hg17\|chr14 (71232324-71232479)