Non-Coding RNA Search

Tra1-TCH01E020050

Sequence:


               
               ATGTACAAAAAGAGACGGTCTGGCAttctcgttgtggctcagtggaaacgaatccgacga
ggaaccacgaggatgcaggttcgatccctggcctccctcagtgggttaaggatctggcgt
tgctgtgagctgtggtgtaggctggcagcaacatctccaattagatccctagcctgggaa
cttccatatgtcataagtgcagccctaaaaggacaaaaGACCAAAAAAAAAAAAAAAAAG
AGAGAGAGAGAGAGAGATGGTCTGAACTGTACCATAAAGTTGGGAGAATTTCTACAAATA
AACCTTGTTGGATGGGTGTTCTTCTATTTCAAGAGGAAGAAACTGCTTGAGGAAGCCCTT
AAAAGAATAACTTTTCTGAAATATTCTGGAAATTGGAGTTAGCCAGTATGGCTAGAGAGT
AAAGGAAAAAGGGGTGATATGTTTGATAACATATTTTGGGTTAGTACCCTTTCACTAAAT
GAAAAAGGCAATTGAAATTGGCTTCTGGCTTCTGTACAAGAAGGAATTTGTTAAGATGAA
TGATTCAAGAGTTCATAGCTTCAGGCATGGCTGGTTCCAGAAAGATCATTGTCTCTCTGT
CTCTGTCTCCATTCTTTCCTCCCCACAACTGTCAGTCCTGCTTCTTTTCTGTCACAGCAA
GGGCTTCTCCATTAGGTGTACCCTGACAGCTGCAGGCTTATCTTACCTGTTTAACTTTGT
AGAAAGCAAGCTTCTTATTTTCACATTAGTTCCTGTTAAACAAAAATTATCCCAGAAATG
GATTTCCTGTCATGGCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATGTACAAAAAGAGACGGTCTGGCAttctcgttgtggctcagtggaaacgaatccgacga
ggaaccacgaggatgcaggttcgatccctggcctccctcagtgggttaaggatctggcgt
tgctgtgagctgtggtgtaggctggcagcaacatctccaattagatccctagcctgggaa
cttccatatgtcataagtgcagccctaaaaggacaaaaGACCAAAAAAAAAAAAAAAAAG
AGAGAGAGAGAGAGAGATGGTCTGAACTGTACCATAAAGTTGGGAGAATTTCTACAAATA
AACCTTGTTGGATGGGTGTTCTTCTATTTCAAGAGGAAGAAACTGCTTGAGGAAGCCCTT
AAAAGAATAACTTTTCTGAAATATTCTGGAAATTGGAGTTAGCCAGTATGGCTAGAGAGT
AAAGGAAAAAGGGGTGATATGTTTGATAACATATTTTGGGTTAGTACCCTTTCACTAAAT
GAAAAAGGCAATTGAAATTGGCTTCTGGCTTCTGTACAAGAAGGAATTTGTTAAGATGAA
TGATTCAAGAGTTCATAGCTTCAGGCATGGCTGGTTCCAGAAAGATCATTGTCTCTCTGT
CTCTGTCTCCATTCTTTCCTCCCCACAACTGTCAGTCCTGCTTCTTTTCTGTCACAGCAA
GGGCTTCTCCATTAGGTGTACCCTGACAGCTGCAGGCTTATCTTACCTGTTTAACTTTGT
AGAAAGCAAGCTTCTTATTTTCACATTAGTTCCTGTTAAACAAAAATTATCCCAGAAATG
GATTTCCTGTCATGGCT

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               328-476, + strand, RNAz p=0.96109

Predicted RNA structure(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               328-476, + strand, RNAz p=0.96109

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

Help | Less info


               
               289-780, gnl|bosTau2|chr3 (20337276-20336764)
               

               
               289-780, gnl|Hg17|chr1 (119562328-119562840)

Aligned organism(s): 2 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               289-780, gnl|bosTau2|chr3 (20337276-20336764)
               

               
               289-780, gnl|Hg17|chr1 (119562328-119562840)

	289-780, gnl\|bosTau2\|chr3 (20337276-20336764)
	289-780, gnl\|Hg17\|chr1 (119562328-119562840)