Tra1-TCH01E050077
               |  | AAGTAAGCTAAATTTACCAAAGATAATCTTGAATTACAGTGGCCGCAGTGGAGAACTTTT
AGCCATTCATGAGGTGCCCAACAGTTTTGTTGTgctcagtgggttaagaaccagactagt
atccatgaggatgcggctttgatccctggccttgatcggtgggttaaggatctgacgttg
ccgcaagctgcaaagtaggtcacagatgtggctcagatcccgtgttgccatggctgtggc
tgtggcctcagttgcagctccaatttaacccatagccagagaacttccacatgacgcagg
tgAAGCCATGGGAAAAAGGGAAGAAAAGAAAAAGGGATCGCAGGCAAGCACTTACTATAA
AAAGTAGAGGGAAAATTATTTTTCTTCTTCTACAGCTTCTGGTGGCCAGGATGAGACCTG
CCGAGACATCCCACTTGCTTTAGAGCCTGCAGATGGGTCCCGGGAAAACTGGCGGAAGCC
CGCAAAGGGTGAGAATTCTTCCCAGAATCAGCTCTCCCGTGTTTCTGCCTGCAGTGCCTA
ATGGAGAGAGGAGGGTACACTCTCACCCTGTTCCTTCCACTCTAGATTGAGGTTGGCAGG
AAAAAAAAACATTTGTGAGAGTTAGACCTTTGAAGGGTGGCTGTGATTGAGTCCCCGTTG
ACCAGTCCTTGCCCTCCCAGGGTCTGCTGTTGCTTTCTCATTTGCCTTGTTTTGTGTCCT
GAGTGCTTTGCTCCGCTCTTTGCCCATGGGGCATACAGGTCGGCAGTTCTTATGTGTGCG
GACAGCTCAGCTGTCAGGTTGGGGACCCCCAAAATGGCTACCCCATTTGTGCTAAGAGTC
CTA | 
Blue-coloured subsequences are predicted RNA structures by RNAz
               |  | AAGTAAGCTAAATTTACCAAAGATAATCTTGAATTACAGTGGCCGCAGTGGAGAACTTTT
AGCCATTCATGAGGTGCCCAACAGTTTTGTTGTgctcagtgggttaagaaccagactagt
atccatgaggatgcggctttgatccctggccttgatcggtgggttaaggatctgacgttg
ccgcaagctgcaaagtaggtcacagatgtggctcagatcccgtgttgccatggctgtggc
tgtggcctcagttgcagctccaatttaacccatagccagagaacttccacatgacgcagg
tgAAGCCATGGGAAAAAGGGAAGAAAAGAAAAAGGGATCGCAGGCAAGCACTTACTATAA
AAAGTAGAGGGAAAATTATTTTTCTTCTTCTACAGCTTCTGGTGGCCAGGATGAGACCTG
CCGAGACATCCCACTTGCTTTAGAGCCTGCAGATGGGTCCCGGGAAAACTGGCGGAAGCC
CGCAAAGGGTGAGAATTCTTCCCAGAATCAGCTCTCCCGTGTTTCTGCCTGCAGTGCCTA
ATGGAGAGAGGAGGGTACACTCTCACCCTGTTCCTTCCACTCTAGATTGAGGTTGGCAGG
AAAAAAAAACATTTGTGAGAGTTAGACCTTTGAAGGGTGGCTGTGATTGAGTCCCCGTTG
ACCAGTCCTTGCCCTCCCAGGGTCTGCTGTTGCTTTCTCATTTGCCTTGTTTTGTGTCCT
GAGTGCTTTGCTCCGCTCTTTGCCCATGGGGCATACAGGTCGGCAGTTCTTATGTGTGCG
GACAGCTCAGCTGTCAGGTTGGGGACCCCCAAAATGGCTACCCCATTTGTGCTAAGAGTC
CTA | 
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map