Non-Coding RNA Search

Tra1-TCH01E050097

Sequence:


               
               TAACAGGGCTGGCAAAAACTGATAAAGACCTTAACTCACCTTACTTCCATGTCCTGGTTC
TGTTTTTAAGTGTTTCACAGCATTGCGTTACTTAAACTTGACTTTGGAAATTTTGTAGTT
ATGGTTATTCGGTATGCAAATTATGTCTATTTCATTTCTCCCAGACCCAGCAAGTTCAGT
CATCATTTCATGGCTTGCAAATGCTTCATAAGCTTCATGCTTTTCTGGGGAGGTTTCTAG
TTAATAAGTAAATTACATTGTTAAAAATAGGCTGAATTTTTATCACGGTGGTGCTATAAA
CATTTGTCTTCCATGTGGGGAACATTTTTCCTTCAGGCTCTGATTTGCAATTCATGATTG
TTTCCTGTCTTATTCTTGTTCTTTCTCAATGATGCAAGATGGACAGAGATACTTTTAGAG
CATACACATTTTAGTCAACATTCAAATGGAATTGGAAGGCCCAAAGGTTTTTCTGTGTAT
GCACAAAAATTCACTCATTTAAAGCGTAAATGTCATTGGTATTTAGTTTATTTCCACACA
ATGTTGGGCAACCATGACTGTTGCAGTAGTCTAATTTTAGTACATTTTCATCACACGGAA
AGAAAACGGGTACCTACTATTAGCACTCCCTCTTCATCCCTCATCCCTGCATCTCACTCC
CTCACCCCAGCCCCTGATCACCACTAACACAGGTGTCTCAATGGATTTGCCTATGGCGAA
TATTGTGTGTATAAATGGAATCATACAATGTATTCTATGATTAGTTCCTGTCATGTAGCA
TAGTGTTGCAGAGTTCATCCATGATGTATCAGAATCTTATTTTTTTGTATT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TAACAGGGCTGGCAAAAACTGATAAAGACCTTAACTCACCTTACTTCCATGTCCTGGTTC
TGTTTTTAAGTGTTTCACAGCATTGCGTTACTTAAACTTGACTTTGGAAATTTTGTAGTT
ATGGTTATTCGGTATGCAAATTATGTCTATTTCATTTCTCCCAGACCCAGCAAGTTCAGT
CATCATTTCATGGCTTGCAAATGCTTCATAAGCTTCATGCTTTTCTGGGGAGGTTTCTAG
TTAATAAGTAAATTACATTGTTAAAAATAGGCTGAATTTTTATCACGGTGGTGCTATAAA
CATTTGTCTTCCATGTGGGGAACATTTTTCCTTCAGGCTCTGATTTGCAATTCATGATTG
TTTCCTGTCTTATTCTTGTTCTTTCTCAATGATGCAAGATGGACAGAGATACTTTTAGAG
CATACACATTTTAGTCAACATTCAAATGGAATTGGAAGGCCCAAAGGTTTTTCTGTGTAT
GCACAAAAATTCACTCATTTAAAGCGTAAATGTCATTGGTATTTAGTTTATTTCCACACA
ATGTTGGGCAACCATGACTGTTGCAGTAGTCTAATTTTAGTACATTTTCATCACACGGAA
AGAAAACGGGTACCTACTATTAGCACTCCCTCTTCATCCCTCATCCCTGCATCTCACTCC
CTCACCCCAGCCCCTGATCACCACTAACACAGGTGTCTCAATGGATTTGCCTATGGCGAA
TATTGTGTGTATAAATGGAATCATACAATGTATTCTATGATTAGTTCCTGTCATGTAGCA
TAGTGTTGCAGAGTTCATCCATGATGTATCAGAATCTTATTTTTTTGTATT

Aligned organism(s): 9 entry(ies)

More info

Aligned organism(s): 9 entry(ies)

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               1-491, gnl|bosTau2|chr4 (68939336-68939831)
               

               
               1-491, gnl|Hg17|chr13 (93463983-93464478)
               

               
               1-491, gnl|Mm7|chr14_random (996495-996027)
               


               
               573-823, gnl|bosTau2|chr4 (68940091-68940345)
               

               
               573-823, gnl|hg17|chr13 (93464862-93465635)
               

               
               573-823, gnl|Hg17|chr13 (93464868-93465124)
               

               
               573-823, gnl|oryCun1|scaffold_155445 (1646-986)
               

               
               573-823, gnl|panTro1|chr14 (76488571-76489343)
               

               
               573-823, gnl|rheMac2|chr17 (74424084-74424849)

Aligned organism(s): 9 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-491, gnl|bosTau2|chr4 (68939336-68939831)
               

               
               1-491, gnl|Hg17|chr13 (93463983-93464478)
               

               
               1-491, gnl|Mm7|chr14_random (996495-996027)
               


               
               573-823, gnl|bosTau2|chr4 (68940091-68940345)
               

               
               573-823, gnl|hg17|chr13 (93464862-93465635)
               

               
               573-823, gnl|Hg17|chr13 (93464868-93465124)
               

               
               573-823, gnl|oryCun1|scaffold_155445 (1646-986)
               

               
               573-823, gnl|panTro1|chr14 (76488571-76489343)
               

               
               573-823, gnl|rheMac2|chr17 (74424084-74424849)

	1-491, gnl\|bosTau2\|chr4 (68939336-68939831)
	1-491, gnl\|Hg17\|chr13 (93463983-93464478)
	1-491, gnl\|Mm7\|chr14_random (996495-996027)

	573-823, gnl\|bosTau2\|chr4 (68940091-68940345)
	573-823, gnl\|hg17\|chr13 (93464862-93465635)
	573-823, gnl\|Hg17\|chr13 (93464868-93465124)
	573-823, gnl\|oryCun1\|scaffold_155445 (1646-986)
	573-823, gnl\|panTro1\|chr14 (76488571-76489343)
	573-823, gnl\|rheMac2\|chr17 (74424084-74424849)