Non-Coding RNA Search

Tra1-TCH01E070008

Sequence:


               
               CAGGCCGCAGCTGCGAGCCTTGGCTGGGCAGGAAAGCCCGCCGGACCGCTGGGGTTGGAG
CTACCGCTGCGGTGATGGCGCATGAAGGCTCGAGGCAGGAGAGGCAGGCACGAGACCGCG
GGATGACTCGATCCAAGGCGGAAAAGGTCCGGCCGCCAACAGTTCCGGTGCCACAGGTGG
ACATCGTGCCTGGGCGGCTTACTGAGGCCGAGTGGATGGCGCTCTCGGTTCTTGAAGAGG
GCGAGGAAGTGGTGGGGGACATCTTGGCTGATCTGCTGGCCCGAGTCATGGACTCCGCCT
TCAAAGTCTACCTGACCCAGCAGTCAGGCACGGGAGGCCATGCTGCAGATCACCGAGTGG
CGCTTCCTGGCCCGGGACGAGGGAGAAACTGCAGTGGCAGAGGACCCTACGTGGGGAGAG
GACGAAGAACCTTCCGCTTGCACGACGGACGCCTGGGCTCAGGGATCCGTGCCCGTGCTG
CACGCGCCCACCTCGGTGGGGCTGGAGGAGACCTTCCCAGGCGAAGACCGAGGGAGCGTG
GATCAGATCACTTTAGGAAGATCGTGGATGGATACAGGCTCTCAGGAACCGATGGAACCT
TGGGACCGCTGTCTTCCAGAGCAGAGGGTCGTCCCAGGTCCCTCATCCACCCTGGAGCTG
CTTAAGGAGACAGGGCCTCGAGGTCCTTTAGAGGAATTGGAACTGGACGGCCAGGCGAGG
GGCCACCTCTCCTCGGTCGGATGCTTGACCGTGAGCAGCCAACTGTCGATGGAGATGGCG
GTCGCAGGCGGTCCTCACCTTTCTCTGGAGCCGAACCCGGTTGCCAGCCCCAAGGGCTCG
GTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CAGGCCGCAGCTGCGAGCCTTGGCTGGGCAGGAAAGCCCGCCGGACCGCTGGGGTTGGAG
CTACCGCTGCGGTGATGGCGCATGAAGGCTCGAGGCAGGAGAGGCAGGCACGAGACCGCG
GGATGACTCGATCCAAGGCGGAAAAGGTCCGGCCGCCAACAGTTCCGGTGCCACAGGTGG
ACATCGTGCCTGGGCGGCTTACTGAGGCCGAGTGGATGGCGCTCTCGGTTCTTGAAGAGG
GCGAGGAAGTGGTGGGGGACATCTTGGCTGATCTGCTGGCCCGAGTCATGGACTCCGCCT
TCAAAGTCTACCTGACCCAGCAGTCAGGCACGGGAGGCCATGCTGCAGATCACCGAGTGG
CGCTTCCTGGCCCGGGACGAGGGAGAAACTGCAGTGGCAGAGGACCCTACGTGGGGAGAG
GACGAAGAACCTTCCGCTTGCACGACGGACGCCTGGGCTCAGGGATCCGTGCCCGTGCTG
CACGCGCCCACCTCGGTGGGGCTGGAGGAGACCTTCCCAGGCGAAGACCGAGGGAGCGTG
GATCAGATCACTTTAGGAAGATCGTGGATGGATACAGGCTCTCAGGAACCGATGGAACCT
TGGGACCGCTGTCTTCCAGAGCAGAGGGTCGTCCCAGGTCCCTCATCCACCCTGGAGCTG
CTTAAGGAGACAGGGCCTCGAGGTCCTTTAGAGGAATTGGAACTGGACGGCCAGGCGAGG
GGCCACCTCTCCTCGGTCGGATGCTTGACCGTGAGCAGCCAACTGTCGATGGAGATGGCG
GTCGCAGGCGGTCCTCACCTTTCTCTGGAGCCGAACCCGGTTGCCAGCCCCAAGGGCTCG
GTC

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               gi|51460638|ref|XP_498904.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|51460638|ref|XP_498904.1|

Aligned organism(s): 6 entry(ies)

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Aligned organism(s): 6 entry(ies)

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               100-329, gnl|bosTau2|chr11 (7906063-7906292)
               

               
               100-329, gnl|Hg17|chr2 (74555025-74554787)
               

               
               100-329, gnl|Mm7|chr6 (83186346-83186575)
               


               
               526-843, gnl|bosTau2|chr11 (7906684-7906989)
               

               
               526-843, gnl|Hg17|chr2 (74554400-74554095)
               

               
               526-843, gnl|Mm7|chr6 (83186993-83187292)

Aligned organism(s): 6 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               100-329, gnl|bosTau2|chr11 (7906063-7906292)
               

               
               100-329, gnl|Hg17|chr2 (74555025-74554787)
               

               
               100-329, gnl|Mm7|chr6 (83186346-83186575)
               


               
               526-843, gnl|bosTau2|chr11 (7906684-7906989)
               

               
               526-843, gnl|Hg17|chr2 (74554400-74554095)
               

               
               526-843, gnl|Mm7|chr6 (83186993-83187292)

	100-329, gnl\|bosTau2\|chr11 (7906063-7906292)
	100-329, gnl\|Hg17\|chr2 (74555025-74554787)
	100-329, gnl\|Mm7\|chr6 (83186346-83186575)

	526-843, gnl\|bosTau2\|chr11 (7906684-7906989)
	526-843, gnl\|Hg17\|chr2 (74554400-74554095)
	526-843, gnl\|Mm7\|chr6 (83186993-83187292)