Non-Coding RNA Search

Tra1-TCH01E100031

Sequence:


               
               TGAACGGTGGATCACTCGGCTCGTGGGTCGATGAAGAACGCAGCAAATTGCGCGTCGACA
TGTGAACTGCAGGACACATGAACATCGACATTTCGAACGCACATTGCGGTCCTTGGATTT
CCAATCCCGGACCACGCCTGGCTGAGGGTCGGCAAAAAAAAAAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGAACGGTGGATCACTCGGCTCGTGGGTCGATGAAGAACGCAGCAAATTGCGCGTCGACA
TGTGAACTGCAGGACACATGAACATCGACATTTCGAACGCACATTGCGGTCCTTGGATTT
CCAATCCCGGACCACGCCTGGCTGAGGGTCGGCAAAAAAAAAAAAAAAAAAAAAAAAAA

ncRNA annotation: 2 entry(ies)

Help | Less info


               
               82-151, RF00002;5_8S_rRNA; (AJ577262.1/22-91), blast E-value=4e-31
               

               
               3-151, RF00002;5_8S_rRNA; (AF321251.1/519-673), RaveNnA Score=124.62

ncRNA annotation: 2 entry(ies)

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PigEST conread start position and end position of sequence/structure similarity to an annotated RNA family,
RNA family (possibly sequence identifier),
blast E-value (sequence sim.) or RaveNnA score (structure sim.)


               
               82-151, RF00002;5_8S_rRNA; (AJ577262.1/22-91), blast E-value=4e-31
               

               
               3-151, RF00002;5_8S_rRNA; (AF321251.1/519-673), RaveNnA Score=124.62

	82-151, RF00002;5_8S_rRNA; (AJ577262.1/22-91), blast E-value=4e-31
	3-151, RF00002;5_8S_rRNA; (AF321251.1/519-673), RaveNnA Score=124.62