Non-Coding RNA Search

Tra1-TCH01E120044

Sequence:


               
               ACCCACTTCCTGGCTTCAGTGTCCCCTCTCTCCAGCGTCTACCCAGTGATCATCACTTTA
GCCAGCCTCTTCGATGCCCTCCTGTTTTGTATGGTTTTAAATTGCAGAGGAACCTACCAT
GGCTTAAGCAAGCTAGGAGTTAGAAGTTAATTTCATCCATATCAAATAAGGCTAGTATGG
CAGCTCCGTTTTCCTGGGGGCCCAAGCCCCTTCCAGCTTTCTGCCTTACCATCCCAGGGT
AACCTCCTTATCCTCATGGCCCTATATAACTGCTAGAGCACCAGCCATCAAATCTAAGTT
TCAAGCAATAGGATGTAAGAAGGGGAAAGGGATCAATAAATGGCACCATTTCTCTTGTGA
GGCTACTTTCTGTAGCTCACACATGACCcttgtgcttacatctccttgatcagaaattgg
tcgtatgagcagagccagctgcaaaggaggctgggaaatgtagtctttTAGTTGGGGCGG
GGCGGGGGGCTATTGCTTTTCCAGCTGAAATGCAGGGTTATGTTACTAAAGAGAAAAGAG
ATTATTTTGAGGCAACTAGAAATCCTTGTGTATgtttgctaggactgctgtaacaaaata
ccatagaccgggttgcttaaataacagcaatttctttgttcacaattctggaggctggaa
gtccgagatgaaggtgtcactgtttgcagggctggtttcttttgaggcctctctccttgg
ctGTTGACCATCTTCCCTCTGTGTGTGCCTCTGTCTAAATTTTCTCCTCTTGTGAAGAAG
TCAGTTATGTTCGATTTAAGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACCCACTTCCTGGCTTCAGTGTCCCCTCTCTCCAGCGTCTACCCAGTGATCATCACTTTA
GCCAGCCTCTTCGATGCCCTCCTGTTTTGTATGGTTTTAAATTGCAGAGGAACCTACCAT
GGCTTAAGCAAGCTAGGAGTTAGAAGTTAATTTCATCCATATCAAATAAGGCTAGTATGG
CAGCTCCGTTTTCCTGGGGGCCCAAGCCCCTTCCAGCTTTCTGCCTTACCATCCCAGGGT
AACCTCCTTATCCTCATGGCCCTATATAACTGCTAGAGCACCAGCCATCAAATCTAAGTT
TCAAGCAATAGGATGTAAGAAGGGGAAAGGGATCAATAAATGGCACCATTTCTCTTGTGA
GGCTACTTTCTGTAGCTCACACATGACCcttgtgcttacatctccttgatcagaaattgg
tcgtatgagcagagccagctgcaaaggaggctgggaaatgtagtctttTAGTTGGGGCGG
GGCGGGGGGCTATTGCTTTTCCAGCTGAAATGCAGGGTTATGTTACTAAAGAGAAAAGAG
ATTATTTTGAGGCAACTAGAAATCCTTGTGTATgtttgctaggactgctgtaacaaaata
ccatagaccgggttgcttaaataacagcaatttctttgttcacaattctggaggctggaa
gtccgagatgaaggtgtcactgtttgcagggctggtttcttttgaggcctctctccttgg
ctGTTGACCATCTTCCCTCTGTGTGTGCCTCTGTCTAAATTTTCTCCTCTTGTGAAGAAG
TCAGTTATGTTCGATTTAAGC

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               155-274, - strand, RNAz p=0.842139

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               155-274, - strand, RNAz p=0.842139

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-596, gnl|bosTau2|chr18 (49964597-49965239)
               

               
               1-596, gnl|Hg17|chr19 (56893696-56894569)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-596, gnl|bosTau2|chr18 (49964597-49965239)
               

               
               1-596, gnl|Hg17|chr19 (56893696-56894569)

	1-596, gnl\|bosTau2\|chr18 (49964597-49965239)
	1-596, gnl\|Hg17\|chr19 (56893696-56894569)