Non-Coding RNA Search

Tra1-TCH01F020006

Sequence:


               
               TATTTTGTTGTTTTATATTCAGGCATGATTTTGTCTGGTTTTTTTTTGAGTTGGGGGGAG
GATACGGGATGAGGGAGGGATCTGAACGGTCCCCCCGGTAGGTGGAGAGGGAGTTGTCCC
AACACCTTGATGGCATGGCCCATCACACCCTCATTCTTTTAAAATGTCACTCTTTGCCGG
GCAGTGTCCCCATGTGCTCGGCTTTTTGTACTGGAATCTTCTGTTCTGCTTTGTTGACCT
GTAGGTGTCTTTCTGTACCAGCCGGTGTTGTTTCAGCCTCTGTAGCATCACAGTCTATTT
TGAGGTCAGTTGTGCAATTACCTCTTCATTGTTCTTTTCAAAAACTGTGTTGATTCTTCT
TGTGCATTAACTCTTTGGGGCAAAACTTCAGAGTTAGCCTGTGAGGTCCGATCCTTTGAT
CTCTTGATCAGGGACAGTAAATGGTGACCTTCAACAGGTGTCAGAGTGCTGGACTTGAGA
GGTGCTGTCCAAGGGGCAGGCTGGTCTCTGGCTGTGGAAATAAATTCATCTGCCGCCGGG
ATGGAGCTGGTCTTTGCACTTTGGGTTCCCATTTGCATGTGAAGTGCTTCAGAGGTGACG
TGGTTGCTGGATTGCCTGGGACACTTCTGCTTTCTTGCTCCTGCCAGCGTCTGCAAAGCC
AGCGCTAGTGCAGCAACTTCCAGTGCTGGCCTGAAGGCAAACGTAATTACTGCATAAATG
ATTGGCTCCCCTCCCCTCGTTCCTTCCAGAACAAAATGTGGGCAAATTTAATTTCTTTCC
TGGGCTGCACCCCTCTATTTACCCAGGTGGGGAGGCGGTACCTGCCAAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TATTTTGTTGTTTTATATTCAGGCATGATTTTGTCTGGTTTTTTTTTGAGTTGGGGGGAG
GATACGGGATGAGGGAGGGATCTGAACGGTCCCCCCGGTAGGTGGAGAGGGAGTTGTCCC
AACACCTTGATGGCATGGCCCATCACACCCTCATTCTTTTAAAATGTCACTCTTTGCCGG
GCAGTGTCCCCATGTGCTCGGCTTTTTGTACTGGAATCTTCTGTTCTGCTTTGTTGACCT
GTAGGTGTCTTTCTGTACCAGCCGGTGTTGTTTCAGCCTCTGTAGCATCACAGTCTATTT
TGAGGTCAGTTGTGCAATTACCTCTTCATTGTTCTTTTCAAAAACTGTGTTGATTCTTCT
TGTGCATTAACTCTTTGGGGCAAAACTTCAGAGTTAGCCTGTGAGGTCCGATCCTTTGAT
CTCTTGATCAGGGACAGTAAATGGTGACCTTCAACAGGTGTCAGAGTGCTGGACTTGAGA
GGTGCTGTCCAAGGGGCAGGCTGGTCTCTGGCTGTGGAAATAAATTCATCTGCCGCCGGG
ATGGAGCTGGTCTTTGCACTTTGGGTTCCCATTTGCATGTGAAGTGCTTCAGAGGTGACG
TGGTTGCTGGATTGCCTGGGACACTTCTGCTTTCTTGCTCCTGCCAGCGTCTGCAAAGCC
AGCGCTAGTGCAGCAACTTCCAGTGCTGGCCTGAAGGCAAACGTAATTACTGCATAAATG
ATTGGCTCCCCTCCCCTCGTTCCTTCCAGAACAAAATGTGGGCAAATTTAATTTCTTTCC
TGGGCTGCACCCCTCTATTTACCCAGGTGGGGAGGCGGTACCTGCCAAG

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               711-829, - strand, RNAz p=0.515087

Predicted RNA structure(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               711-829, - strand, RNAz p=0.515087

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

Help | Less info


               
               2-829, gnl|bosTau2|chr29 (39254446-39253610)
               

               
               2-829, gnl|Hg17|chr11 (67845066-67845882)

Aligned organism(s): 2 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-829, gnl|bosTau2|chr29 (39254446-39253610)
               

               
               2-829, gnl|Hg17|chr11 (67845066-67845882)

	2-829, gnl\|bosTau2\|chr29 (39254446-39253610)
	2-829, gnl\|Hg17\|chr11 (67845066-67845882)