Non-Coding RNA Search

Tra1-TCH01F030077

Sequence:


               
               AAGCAAGTACGTGGCAGAGCTAAAATCCAAACCCATGACTGCCTCCTTCCTATCTCATAT
TCTACTACTGCTATTACCTCTTCATTTGAAAAAAAAAAAAAAAAACCCTGCTCTTCAGTC
TTCTCCAAGTAAAACAATTTCTTTTTTTTTTTAAGGGTCTTTCCTCATTTTTAAGGGATA
TCATTGCATTTTATAATACTGGATGCCTGTCAGTTGAAGACCTGTCACCAAAGTACAGGG
TGATCCTTCTTGCCTAGATTAAGAAATAATCACATATATATTTCTGTCCTCTAAATATTT
CTTTTTTCTATCTGCCTGCCTGTGTGTTGGTTTGTTCCTCAAACACTGCTGTTCTGCCCC
TTAGTGAACAAGAAATTGCCCTGCTGTTCTTAGACGTTGGCACAAAACATTTAAGCATGT
TGGTTTTATGTATTTGCTCCAAAACATGAATGTAGATACTTTTCTCTTCCTCTTCCTTAG
GTTTCCTTTTAGAGATGCTTTATAAAAAGACCAGTGAGGGCCAGGGCTGAATCAGCTGGA
GTTCGTGCAGCCCTGAACACCATTGGGATTGCTCTCACCCCGAATGAGGAGTTCATTGTC
CTCAAAGACATTATGTTAAAGCCCTTAACTGTGAACTTTCAGTCAAGATGCTAGACTTGC
CAGTTAGTTACACAGAAACTATTCTGTCCGGGCTGGAATGTGGCAGTTAAGACAGGGGAA
CTTTGATCTTCAAGATAAAGTGGGTACAGACACTAGCGCACTGTTGCCGTTTTACCACAG
TTTTAATTCGTATAGTTTTTTCTCACTTTAATCTAAATTCCTTCAACCTGTGTCCAGTGT
GAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAGCAAGTACGTGGCAGAGCTAAAATCCAAACCCATGACTGCCTCCTTCCTATCTCATAT
TCTACTACTGCTATTACCTCTTCATTTGAAAAAAAAAAAAAAAAACCCTGCTCTTCAGTC
TTCTCCAAGTAAAACAATTTCTTTTTTTTTTTAAGGGTCTTTCCTCATTTTTAAGGGATA
TCATTGCATTTTATAATACTGGATGCCTGTCAGTTGAAGACCTGTCACCAAAGTACAGGG
TGATCCTTCTTGCCTAGATTAAGAAATAATCACATATATATTTCTGTCCTCTAAATATTT
CTTTTTTCTATCTGCCTGCCTGTGTGTTGGTTTGTTCCTCAAACACTGCTGTTCTGCCCC
TTAGTGAACAAGAAATTGCCCTGCTGTTCTTAGACGTTGGCACAAAACATTTAAGCATGT
TGGTTTTATGTATTTGCTCCAAAACATGAATGTAGATACTTTTCTCTTCCTCTTCCTTAG
GTTTCCTTTTAGAGATGCTTTATAAAAAGACCAGTGAGGGCCAGGGCTGAATCAGCTGGA
GTTCGTGCAGCCCTGAACACCATTGGGATTGCTCTCACCCCGAATGAGGAGTTCATTGTC
CTCAAAGACATTATGTTAAAGCCCTTAACTGTGAACTTTCAGTCAAGATGCTAGACTTGC
CAGTTAGTTACACAGAAACTATTCTGTCCGGGCTGGAATGTGGCAGTTAAGACAGGGGAA
CTTTGATCTTCAAGATAAAGTGGGTACAGACACTAGCGCACTGTTGCCGTTTTACCACAG
TTTTAATTCGTATAGTTTTTTCTCACTTTAATCTAAATTCCTTCAACCTGTGTCCAGTGT
GAA

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               530-649, - strand, RNAz p=0.90395

Predicted RNA structure(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               530-649, - strand, RNAz p=0.90395

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               2-839, gnl|bosTau2|chr6 (66904257-66903427)
               

               
               2-839, gnl|Hg17|chr9 (14274104-14273315)
               

               
               2-839, gnl|Mm7|chr4 (81881004-81880128)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-839, gnl|bosTau2|chr6 (66904257-66903427)
               

               
               2-839, gnl|Hg17|chr9 (14274104-14273315)
               

               
               2-839, gnl|Mm7|chr4 (81881004-81880128)

	2-839, gnl\|bosTau2\|chr6 (66904257-66903427)
	2-839, gnl\|Hg17\|chr9 (14274104-14273315)
	2-839, gnl\|Mm7\|chr4 (81881004-81880128)