Tra1-TCH01F050029
               |  | ATTTTGATTTTATCCCTATTGCTGAGTGTTTTGGCACTTTCTGAAAATTCATACCTGAGG
CGAGTGCCTCACTCACCTTGCCTTCCTCCCAAACCTAACTTCCATCTTAAACGCCTTGAA
GACCAGACAAAACACATGAAACAATAGTTCTCAGACGCTGGTCAACAGGCAGGTTAGGAC
TCTGTTCCTTGAAATAAGGGAAATGAAAGAAATGAGCTGTACAGTCACTCCAACTTAATC
TCTAGAGCAGGGAGAAACAGactttctctataaagggccagatagtgagtgtcttagact
ttgcagaccatacggtctctgtcATAGTCATTCGACTCTGCCATTGTCTGTGACTACTTT
CATACCAAGTATGAAAATGAATGGCCATGGGTATGTTCTAATAAAACTTTATTTATAGAG
ACAGCAGGTTGGATTTGGTCCTCAGGTCACAGTTTGCCCATCCTGGTCTAGAGACAGTTT
CCATGTTACAGGACAGGGAGAGAGAAAAGGTGCTGAGTTAGTTCTGGACTAAAGGACTGC
TGCAGACTTGCCCTAACTGATTCCAGGTAACTCAACTGCATTCCCAGAACAAAGTCCCTG
CTGTAGCTTAAAGGACATGATAAAATCCGGCATCCAACAATGTAAAAAAGTTTCGTGTCC
AGCATCTAACAGAAATTACCAGGACTGCAAAGAAGCAAGAAAAGGTGATCTTAACCAGGA
GGAAAATCAGTCAATAGAAACTCAGAAATAGGAATTCCTGTCGTGGCTCAATGGTCACGA
ACCCAACTGGTATCCACAATGACGCAAGTT | 
Blue-coloured subsequences are predicted RNA structures by RNAz
               |  | ATTTTGATTTTATCCCTATTGCTGAGTGTTTTGGCACTTTCTGAAAATTCATACCTGAGG
CGAGTGCCTCACTCACCTTGCCTTCCTCCCAAACCTAACTTCCATCTTAAACGCCTTGAA
GACCAGACAAAACACATGAAACAATAGTTCTCAGACGCTGGTCAACAGGCAGGTTAGGAC
TCTGTTCCTTGAAATAAGGGAAATGAAAGAAATGAGCTGTACAGTCACTCCAACTTAATC
TCTAGAGCAGGGAGAAACAGactttctctataaagggccagatagtgagtgtcttagact
ttgcagaccatacggtctctgtcATAGTCATTCGACTCTGCCATTGTCTGTGACTACTTT
CATACCAAGTATGAAAATGAATGGCCATGGGTATGTTCTAATAAAACTTTATTTATAGAG
ACAGCAGGTTGGATTTGGTCCTCAGGTCACAGTTTGCCCATCCTGGTCTAGAGACAGTTT
CCATGTTACAGGACAGGGAGAGAGAAAAGGTGCTGAGTTAGTTCTGGACTAAAGGACTGC
TGCAGACTTGCCCTAACTGATTCCAGGTAACTCAACTGCATTCCCAGAACAAAGTCCCTG
CTGTAGCTTAAAGGACATGATAAAATCCGGCATCCAACAATGTAAAAAAGTTTCGTGTCC
AGCATCTAACAGAAATTACCAGGACTGCAAAGAAGCAAGAAAAGGTGATCTTAACCAGGA
GGAAAATCAGTCAATAGAAACTCAGAAATAGGAATTCCTGTCGTGGCTCAATGGTCACGA
ACCCAACTGGTATCCACAATGACGCAAGTT | 
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map