Tra1-TCH01F070032
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AGATTGTTTTTCTCAGAAGGGCTGTGCTGCCTTGGCTATAATTCCTAGTCTTTCCCTCTC
TAGAAAGGAAGGAAGCCAAAAAAGGAGTGGGAAGGGAAGTAGTCTAAGACTTTAGAAGGG
CAAAAACCACCAAGTGGGTGGTGCCGACAAAGCCCCAGTGCCCGCTGAGTCAGTGACCTC
CAGGCTCAAATTGGGACACGTGGTCTGACAACCAGTGACTAttttgttttggccacaccc
atggcatgtagaagttccttggccaagggattgaacccgcgccacagcagcaacccaagc
tgctgcaatgacaatgctgggtccctaacccaatgcgccacaagagaactcccAACCAAT
GGCTATTTAAATCCTTACACTGGCCATCGGGTGCTAGGAGACAGCAGGTGCTGTGCAGAG
GTCAAAATCCGGGCAGACTGACCTAAGATTGAATCCAAGCTCCACCACTTTCTCGCTTTA
GGCCTCATCCGCCTTTTCTCTAAAGCAGGGATAACAAGAAGTTTGcttgtggtgcagcag
gttaagaacccggtgttgtcactgcaggggcttgggttgcttctgtggtgcaggttcagt
ccctgacctgagaactgccacgtgccaTGGAAGCAGCCAAAAAAAAATTAAAATAAAAAA
ATAAAATGGGGACAACAGAGCAGTTGTGAGGATTCAGTGAGTTAGTTGTGGAATTAATGA
GTCATGTGTGTAAAGTGCTGATAGCTATTTATTCATTCATGGATTTATCCATTNCATAAA
AAATTATTACACATCGACC
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Blue-coloured subsequences are predicted RNA structures by RNAz
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AGATTGTTTTTCTCAGAAGGGCTGTGCTGCCTTGGCTATAATTCCTAGTCTTTCCCTCTC
TAGAAAGGAAGGAAGCCAAAAAAGGAGTGGGAAGGGAAGTAGTCTAAGACTTTAGAAGGG
CAAAAACCACCAAGTGGGTGGTGCCGACAAAGCCCCAGTGCCCGCTGAGTCAGTGACCTC
CAGGCTCAAATTGGGACACGTGGTCTGACAACCAGTGACTAttttgttttggccacaccc
atggcatgtagaagttccttggccaagggattgaacccgcgccacagcagcaacccaagc
tgctgcaatgacaatgctgggtccctaacccaatgcgccacaagagaactcccAACCAAT
GGCTATTTAAATCCTTACACTGGCCATCGGGTGCTAGGAGACAGCAGGTGCTGTGCAGAG
GTCAAAATCCGGGCAGACTGACCTAAGATTGAATCCAAGCTCCACCACTTTCTCGCTTTA
GGCCTCATCCGCCTTTTCTCTAAAGCAGGGATAACAAGAAGTTTGcttgtggtgcagcag
gttaagaacccggtgttgtcactgcaggggcttgggttgcttctgtggtgcaggttcagt
ccctgacctgagaactgccacgtgccaTGGAAGCAGCCAAAAAAAAATTAAAATAAAAAA
ATAAAATGGGGACAACAGAGCAGTTGTGAGGATTCAGTGAGTTAGTTGTGGAATTAATGA
GTCATGTGTGTAAAGTGCTGATAGCTATTTATTCATTCATGGATTTATCCATTNCATAAA
AAATTATTACACATCGACC
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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
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2-224, gnl|bosTau2|chr2 (77926340-77926120) |
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2-224, gnl|canFam2|chr2 (75689935-75689591) |
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2-224, gnl|dasNov1|scaffold_2630 (42966-42635) |
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2-224, gnl|echTel1|scaffold_309841 (112200-112569) |
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2-224, gnl|hg17|chr1 (27502969-27503308) |
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2-224, gnl|Hg17|chr1 (27503027-27503245) |
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2-224, gnl|loxAfr1|scaffold_57266 (8885-8546) |
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2-224, gnl|mm7|chr4 (132506964-132506658) |
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2-224, gnl|Mm7|chr4 (132506906-132506720) |
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2-224, gnl|oryCun1|scaffold_204038 (45973-45649) |
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2-224, gnl|panTro1|chr1 (28183310-28183649) |
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2-224, gnl|rheMac2|chr1 (30171076-30171415) |
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2-224, gnl|rn3|chr5 (152003754-152004032) |
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662-799, gnl|bosTau2|chr2 (77925696-77925557) |
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662-799, gnl|Hg17|chr1 (27503378-27503516) |
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662-799, gnl|Mm7|chr4 (132506342-132506027) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
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2-224, gnl|bosTau2|chr2 (77926340-77926120) |
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2-224, gnl|canFam2|chr2 (75689935-75689591) |
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2-224, gnl|dasNov1|scaffold_2630 (42966-42635) |
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2-224, gnl|echTel1|scaffold_309841 (112200-112569) |
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2-224, gnl|hg17|chr1 (27502969-27503308) |
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2-224, gnl|Hg17|chr1 (27503027-27503245) |
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2-224, gnl|loxAfr1|scaffold_57266 (8885-8546) |
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2-224, gnl|mm7|chr4 (132506964-132506658) |
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2-224, gnl|Mm7|chr4 (132506906-132506720) |
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2-224, gnl|oryCun1|scaffold_204038 (45973-45649) |
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2-224, gnl|panTro1|chr1 (28183310-28183649) |
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2-224, gnl|rheMac2|chr1 (30171076-30171415) |
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2-224, gnl|rn3|chr5 (152003754-152004032) |
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662-799, gnl|bosTau2|chr2 (77925696-77925557) |
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662-799, gnl|Hg17|chr1 (27503378-27503516) |
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662-799, gnl|Mm7|chr4 (132506342-132506027) |
