Non-Coding RNA Search

Tra1-TCH01F090052

Sequence:


               
               TTTTGCCCGCCAGGGGACATGGGACAGTGTCTGGAGACATTTGTGGTTACCGTATCCTCG
GGGCAGGGGTGGGGAGTGGCAGTGAAGGAGGGAAGGTGATACCAGCATCTAGTGGGCACA
GTCCAGGGATGCTGGTAAACTCCCTGCCATGTCCTGCAGGACAGCCTCCGCAGCAAGGTG
TCCATGGGGCCGAGGTTGCGAAGCTGTGCTCTGTAGCGTCCTAAACAGGTCCCGCAGGTG
GTGTCACAGGACTTGTAGCGGATGGGGGTGGAGCTCTTGACACAGCCCAGGACTTTTGAG
CGGCCTCTCCTCTGGACAATTAGGAAAGAATTAACAGCAGATCGCTCTCACCGAGGCCCG
TCTAGAACGTGCTCTCATTCAAGGTGCTAATTACAGTGTTTTGTTGCCAGTGAAAACAAG
CGTCAGATTTCATGATTGATTCATGATCATTTTAAAATTAATGCTGCTATTATCCTACAA
AGCATGGTAAGTGGAGGGGAGAGAATTTTTGCTTTGGGATACTAAGTCAACATCGCAGTA
AACACCCAGCAAACCCATTTATCTCAGGCTTAATGCTTTGTTGTTTCTCCTAAGCTCTTC
TTAGGTGCCTCTGGGCTTTTTAACATTCTTTGGCAGTTGTAATTTATTAATTGATTTTTA
AATTTGGCTTGCGAAAATGAACTTTAGTTAGGGGTTTTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTTGCCCGCCAGGGGACATGGGACAGTGTCTGGAGACATTTGTGGTTACCGTATCCTCG
GGGCAGGGGTGGGGAGTGGCAGTGAAGGAGGGAAGGTGATACCAGCATCTAGTGGGCACA
GTCCAGGGATGCTGGTAAACTCCCTGCCATGTCCTGCAGGACAGCCTCCGCAGCAAGGTG
TCCATGGGGCCGAGGTTGCGAAGCTGTGCTCTGTAGCGTCCTAAACAGGTCCCGCAGGTG
GTGTCACAGGACTTGTAGCGGATGGGGGTGGAGCTCTTGACACAGCCCAGGACTTTTGAG
CGGCCTCTCCTCTGGACAATTAGGAAAGAATTAACAGCAGATCGCTCTCACCGAGGCCCG
TCTAGAACGTGCTCTCATTCAAGGTGCTAATTACAGTGTTTTGTTGCCAGTGAAAACAAG
CGTCAGATTTCATGATTGATTCATGATCATTTTAAAATTAATGCTGCTATTATCCTACAA
AGCATGGTAAGTGGAGGGGAGAGAATTTTTGCTTTGGGATACTAAGTCAACATCGCAGTA
AACACCCAGCAAACCCATTTATCTCAGGCTTAATGCTTTGTTGTTTCTCCTAAGCTCTTC
TTAGGTGCCTCTGGGCTTTTTAACATTCTTTGGCAGTTGTAATTTATTAATTGATTTTTA
AATTTGGCTTGCGAAAATGAACTTTAGTTAGGGGTTTTG

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               57-175, + strand, RNAz p=0.999825

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               57-175, + strand, RNAz p=0.999825

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               57-697, gnl|bosTau2|chr18 (3804478-3803839)
               

               
               57-697, gnl|Mm7|chr8 (113406155-113406696)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               57-697, gnl|bosTau2|chr18 (3804478-3803839)
               

               
               57-697, gnl|Mm7|chr8 (113406155-113406696)

	57-697, gnl\|bosTau2\|chr18 (3804478-3803839)
	57-697, gnl\|Mm7\|chr8 (113406155-113406696)