Tra1-TCH01F120024
|
AATTGCTATGCAGTTAACACAGAGTAATTTTGTATCTGATGAAAAATTAAAAATTTTGAG
ATTAGCTTCTGCGAAGTTCACCAGATGGTTTTTTAAGTGCAACCAAACATTCGACTCATC
AGTCATTTTATATCAGATTTACTTAGAGAAGGGTTTAGAATAGGAAAAATATCTTGCCAG
TAGGGCAATGTCAAGTATTTTTCTTCTGGGAGAGTAATTCTCACCGTGGTCCATATATCC
ATCCAAGAGCTGTTCTCTTTGGCCCCCCCAAGTGACAGCTCAGGTTCAGGAAGACAGATT
CACACTGGTGGGTAGGTAGTCCACCTTGGCTTATAGTCTCTATGCCCCTCGAGAGCCAAT
ATCTTTGAATACTACAAAGTCATTTTGGGAGTACCAtcgtggcccagcagaaatgaatct
gattagtatccatgaggacgcaggtttgatccctggcctagcttagtgggttaaggatcc
ggcattgccatgagctgtggtgtaggccacagacatggcttggatctggtgttgctgtgg
ctatggtgtaagccggcagctacagctcctgattcaacccctagcctagaacctccatat
gccacaggcccggccTTAAAAAGGCAAAAAAAAATCAAAAAACAAAAGGTCATTGCGGTA
TTGTGTCTATGTGGAGCATGAGAGAGTGATGGATAGGAAGATCTTATTGAGATTGTTTAG
TTGGAATGCTTATTTACACATATATTATTTAAGAAGTATATGCCTATTTCAAGAGTTGCT
ATACTCATAGAGAAGCACAAAGATCTGGCTTCTCAG
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
AATTGCTATGCAGTTAACACAGAGTAATTTTGTATCTGATGAAAAATTAAAAATTTTGAG
ATTAGCTTCTGCGAAGTTCACCAGATGGTTTTTTAAGTGCAACCAAACATTCGACTCATC
AGTCATTTTATATCAGATTTACTTAGAGAAGGGTTTAGAATAGGAAAAATATCTTGCCAG
TAGGGCAATGTCAAGTATTTTTCTTCTGGGAGAGTAATTCTCACCGTGGTCCATATATCC
ATCCAAGAGCTGTTCTCTTTGGCCCCCCCAAGTGACAGCTCAGGTTCAGGAAGACAGATT
CACACTGGTGGGTAGGTAGTCCACCTTGGCTTATAGTCTCTATGCCCCTCGAGAGCCAAT
ATCTTTGAATACTACAAAGTCATTTTGGGAGTACCAtcgtggcccagcagaaatgaatct
gattagtatccatgaggacgcaggtttgatccctggcctagcttagtgggttaaggatcc
ggcattgccatgagctgtggtgtaggccacagacatggcttggatctggtgttgctgtgg
ctatggtgtaagccggcagctacagctcctgattcaacccctagcctagaacctccatat
gccacaggcccggccTTAAAAAGGCAAAAAAAAATCAAAAAACAAAAGGTCATTGCGGTA
TTGTGTCTATGTGGAGCATGAGAGAGTGATGGATAGGAAGATCTTATTGAGATTGTTTAG
TTGGAATGCTTATTTACACATATATTATTTAAGAAGTATATGCCTATTTCAAGAGTTGCT
ATACTCATAGAGAAGCACAAAGATCTGGCTTCTCAG
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
23-388, gnl|bosTau2|chr7 (46231446-46231087) |
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23-388, gnl|Hg17|chr7 (33088134-33088498) |
| |
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638-814, gnl|bosTau2|chr7 (46231108-46230921) |
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638-814, gnl|canFam2|chr14 (48276523-48276712) |
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638-814, gnl|dasNov1|scaffold_142112 (5625-5818) |
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638-814, gnl|hg17|chr7 (33088394-33088596) |
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638-814, gnl|Hg17|chr7 (33088477-33088657) |
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638-814, gnl|loxAfr1|scaffold_32730 (10912-11109) |
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638-814, gnl|oryCun1|scaffold_6677 (521-340) |
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638-814, gnl|panTro1|chr6 (34204696-34204898) |
|
638-814, gnl|rheMac2|chr3 (92882346-92882144) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
23-388, gnl|bosTau2|chr7 (46231446-46231087) |
|
23-388, gnl|Hg17|chr7 (33088134-33088498) |
| |
|
638-814, gnl|bosTau2|chr7 (46231108-46230921) |
|
638-814, gnl|canFam2|chr14 (48276523-48276712) |
|
638-814, gnl|dasNov1|scaffold_142112 (5625-5818) |
|
638-814, gnl|hg17|chr7 (33088394-33088596) |
|
638-814, gnl|Hg17|chr7 (33088477-33088657) |
|
638-814, gnl|loxAfr1|scaffold_32730 (10912-11109) |
|
638-814, gnl|oryCun1|scaffold_6677 (521-340) |
|
638-814, gnl|panTro1|chr6 (34204696-34204898) |
|
638-814, gnl|rheMac2|chr3 (92882346-92882144) |
