Non-Coding RNA Search

Tra1-TCH01H030059

Sequence:


               
               ACCCACTGAAGCACAATGGGCACTCCCACAAGACACAGTTTGAAAGGGATCATATATGAA
AAAGTACAAGAGGTGGGGAAGGGGAAAAAAGAGGATAGATAATTGATATACTATGATTGT
ATCCCTACCTGAAATACACTGAAAACCCTTGGTCTGAGCTTAACTGTTCATTTCATACTA
AGATGACTCATTGTGCTGCTACAGAGTTATCTCATCCTAGTTTCAGTCCTGACCTCCACC
ATCCTGTGTGGTCGGTTTCCCAGAGCCCAGATCCAAGATAAGGAACAGTTTCCTTCCTTT
TCTCTATTCCCTTCCTTTCACTCTTTATCCCAGACTATTTCCCCAGATCAATAAGTCCCA
ATTCTCTTTACTGGCTTAGTCTTTCCAAATTCTTTCCACATAATTGACAATGGCTATGTT
TATTTTTAGGTGACCAACTCCCCCAGTTTGCCCTCAGTTTTCACAGTTCTAGCACTGAAC
TGTGCTGTGTCCTGGGAAGCCCTTTAGTCCTTAGCATACTGGGACAGTTGGTCACCCTGC
TTCCGGGGAAGCATCCTCTTACCTTCAAGGGGGTGACTCCTCTGGAAAAATCCTATCAGA
ATACCAGAATATAATCAACAATGAGTTAGTGTCTTTTTTGTTTTTTGTTTTTGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACCCACTGAAGCACAATGGGCACTCCCACAAGACACAGTTTGAAAGGGATCATATATGAA
AAAGTACAAGAGGTGGGGAAGGGGAAAAAAGAGGATAGATAATTGATATACTATGATTGT
ATCCCTACCTGAAATACACTGAAAACCCTTGGTCTGAGCTTAACTGTTCATTTCATACTA
AGATGACTCATTGTGCTGCTACAGAGTTATCTCATCCTAGTTTCAGTCCTGACCTCCACC
ATCCTGTGTGGTCGGTTTCCCAGAGCCCAGATCCAAGATAAGGAACAGTTTCCTTCCTTT
TCTCTATTCCCTTCCTTTCACTCTTTATCCCAGACTATTTCCCCAGATCAATAAGTCCCA
ATTCTCTTTACTGGCTTAGTCTTTCCAAATTCTTTCCACATAATTGACAATGGCTATGTT
TATTTTTAGGTGACCAACTCCCCCAGTTTGCCCTCAGTTTTCACAGTTCTAGCACTGAAC
TGTGCTGTGTCCTGGGAAGCCCTTTAGTCCTTAGCATACTGGGACAGTTGGTCACCCTGC
TTCCGGGGAAGCATCCTCTTACCTTCAAGGGGGTGACTCCTCTGGAAAAATCCTATCAGA
ATACCAGAATATAATCAACAATGAGTTAGTGTCTTTTTTGTTTTTTGTTTTTGT

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               439-620, - strand, RNAz p=0.97654

Predicted RNA structure(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               439-620, - strand, RNAz p=0.97654

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

Help | Less info


               
               172-620, gnl|bosTau2|chr15 (48387774-48387325)
               

               
               172-620, gnl|Hg17|chr11 (46575995-46575218)

Aligned organism(s): 2 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               172-620, gnl|bosTau2|chr15 (48387774-48387325)
               

               
               172-620, gnl|Hg17|chr11 (46575995-46575218)

	172-620, gnl\|bosTau2\|chr15 (48387774-48387325)
	172-620, gnl\|Hg17\|chr11 (46575995-46575218)