Non-Coding RNA Search

Tra1-TCH01H040037

Sequence:


               
               ACTCTACAGACCACGCTGGCTTAAAATATGAAGTGGTTTATGGCACACTAAATTGAAGGC
ATCTTGGCTAAAATACATTTGAAAGACACAACACGGGCATGGATCACTTTATTTCCATTT
CCAACTGTCAGCAGAAATTGGAGAAAACACTCTTCCTTTCTGTTTGATTATTCTGTTATC
GACAGAATGAGAGTGTGGGAGACATACATGCTGATTTAGTGTTGTGCTGATGAAACCATT
CAGGTTGTGTGATGTGTCATTTGTCACTGCTGCCTTATCAAGGTGTTTCAGCTGTGCCCA
AATCAGCCCTGGTAATTGCTGCAGTTGCTTGTGGCAAAGTTATGTCAATGTCAGTCACTA
AATGACTTTTGACTGCCTCATGTCAGATGTTCCCTCCAGAGGAAGGCAGGACAGGGGGCT
TTTTACACCCAGGTATGGGTATAAATCCAACATCTAAATAGACAGGTTCATTTTTTTCCT
AATCATAACTTCAATGCAAATGCTGGCATTTTATGTTTTAAAATGAAGGGAATACAATTA
AGTTTAGGATTCACTTCAAAGTGTAATCTCCTGTTATATTGATAGCTTTCCTTTTTTGGT
CCTAAGGGTGAATTTAAGTCAAGTACAGCTTTAAACACGTGCACTGTAATAACGGTTATC
ACTGAAGGTGTACAATTTCTGCCTAAAACATCCTTCTTCTTAATGTAACTCAAGGGCCTT
CTCCAAACCCTTTATAGTCTCAAATTCAGTTTTGTTTTTTTTTTTTATGATGTTTGGAAT
CAAAGGAGATGTACAATGAAAGGGGTTGACAAAGAGTTGCAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACTCTACAGACCACGCTGGCTTAAAATATGAAGTGGTTTATGGCACACTAAATTGAAGGC
ATCTTGGCTAAAATACATTTGAAAGACACAACACGGGCATGGATCACTTTATTTCCATTT
CCAACTGTCAGCAGAAATTGGAGAAAACACTCTTCCTTTCTGTTTGATTATTCTGTTATC
GACAGAATGAGAGTGTGGGAGACATACATGCTGATTTAGTGTTGTGCTGATGAAACCATT
CAGGTTGTGTGATGTGTCATTTGTCACTGCTGCCTTATCAAGGTGTTTCAGCTGTGCCCA
AATCAGCCCTGGTAATTGCTGCAGTTGCTTGTGGCAAAGTTATGTCAATGTCAGTCACTA
AATGACTTTTGACTGCCTCATGTCAGATGTTCCCTCCAGAGGAAGGCAGGACAGGGGGCT
TTTTACACCCAGGTATGGGTATAAATCCAACATCTAAATAGACAGGTTCATTTTTTTCCT
AATCATAACTTCAATGCAAATGCTGGCATTTTATGTTTTAAAATGAAGGGAATACAATTA
AGTTTAGGATTCACTTCAAAGTGTAATCTCCTGTTATATTGATAGCTTTCCTTTTTTGGT
CCTAAGGGTGAATTTAAGTCAAGTACAGCTTTAAACACGTGCACTGTAATAACGGTTATC
ACTGAAGGTGTACAATTTCTGCCTAAAACATCCTTCTTCTTAATGTAACTCAAGGGCCTT
CTCCAAACCCTTTATAGTCTCAAATTCAGTTTTGTTTTTTTTTTTTATGATGTTTGGAAT
CAAAGGAGATGTACAATGAAAGGGGTTGACAAAGAGTTGCAT

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               362-478, + strand, RNAz p=0.710201

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               362-478, + strand, RNAz p=0.710201

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               4-818, gnl|bosTau2|chr12 (34152783-34151965)
               

               
               4-818, gnl|Hg17|chr13 (93124738-93125576)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               4-818, gnl|bosTau2|chr12 (34152783-34151965)
               

               
               4-818, gnl|Hg17|chr13 (93124738-93125576)

	4-818, gnl\|bosTau2\|chr12 (34152783-34151965)
	4-818, gnl\|Hg17\|chr13 (93124738-93125576)