Tra1-TCH01H080089
               |  | TTATTTATTTATTTATTTATTTGGTTTGTTTTATGTTTCTGTAGGGGAATAAGAGTTGAG
TGTCCTAGTCCACCGTTTTGCTAATGTCCTATAGTGACTTTTTACAGAAATTGTGGCACT
TGTTTCCTGTACCTCCTCCTTCTCACCTCATGGAGCTCTAGAACATCCTGTTCTCATTCT
CTAAATTTTCTGTGCCTCTCTTCTCTCTAGATTGCCTTGCCCCACCTCCATCTTATTCTT
TTTAAATTCTGTTCTTTAAAGATCAGCTCaaacaaatgagacctgattaaatataaaaac
ttttgcacagcaaaggaaaccatacacaaaaccaaaagacagcctatgactgggagaaaa
tatttgcaaatgatgctacccaaaagtaatcaacttcgaaaatatacaagcatcttggat
aacttaacataaccgcccccccccaaacccaggatgttcccattgtggcttagcagctta
tgaaccctatagtatccatgaggacacggttcaatccctggccttgcttagcgggttaag
gatctggcattgctgtgagctgtggtgtaggtctcagacaaggctcggatctcatgtggc
tgtggctgtggcacaggccagtgactccagctacaattcgacccctaacctggaaacATA
AGCCACAGTGTGGCCCTAAGAACCACCCCCTCCACTGAAAAAAAAAAAAAATAAAACAAC
Ccaaacaacccaatcagaaagtaagcagaagacctaaatagacatttttccaaagaagac
atacagatagccaacaggcacctgaaaagttgctcaGTATCA | 
Blue-coloured subsequences are predicted RNA structures by RNAz
               |  | TTATTTATTTATTTATTTATTTGGTTTGTTTTATGTTTCTGTAGGGGAATAAGAGTTGAG
TGTCCTAGTCCACCGTTTTGCTAATGTCCTATAGTGACTTTTTACAGAAATTGTGGCACT
TGTTTCCTGTACCTCCTCCTTCTCACCTCATGGAGCTCTAGAACATCCTGTTCTCATTCT
CTAAATTTTCTGTGCCTCTCTTCTCTCTAGATTGCCTTGCCCCACCTCCATCTTATTCTT
TTTAAATTCTGTTCTTTAAAGATCAGCTCaaacaaatgagacctgattaaatataaaaac
ttttgcacagcaaaggaaaccatacacaaaaccaaaagacagcctatgactgggagaaaa
tatttgcaaatgatgctacccaaaagtaatcaacttcgaaaatatacaagcatcttggat
aacttaacataaccgcccccccccaaacccaggatgttcccattgtggcttagcagctta
tgaaccctatagtatccatgaggacacggttcaatccctggccttgcttagcgggttaag
gatctggcattgctgtgagctgtggtgtaggtctcagacaaggctcggatctcatgtggc
tgtggctgtggcacaggccagtgactccagctacaattcgacccctaacctggaaacATA
AGCCACAGTGTGGCCCTAAGAACCACCCCCTCCACTGAAAAAAAAAAAAAATAAAACAAC
Ccaaacaacccaatcagaaagtaagcagaagacctaaatagacatttttccaaagaagac
atacagatagccaacaggcacctgaaaagttgctcaGTATCA | 
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map