Non-Coding RNA Search

Utr1-UTR010006F01

Sequence:


               
               TACCAAGAAAAACCCTTCATTTGCTTTACATCTGGCATATTGCTTTATGCAGTTGGCCAG
AACTTTTGCACATGGCCCTCTGCATTTGTCCTAAGGTAATTAATGGCTTTGCAATATTTG
ATCAGCAGCAGCATGGACACAAAGAGAAGTTGTGCAACCAACACAGACCACACAGTCTTT
TAAATGAAAACCTTTTGCATTAAAACACTCAGGCGTTCTGCAAGGATAAGTGTTTCCATG
CCACAAAGGAAAAAAGGGGGGGGCACACTGAAGCCCCTGGGAAGACACCCAAAACTTGAT
TCTTGATTAAGTCTATATCTCTCCAATAAAACTACCTAACTCTTCAAAGGAAGTAAAATG
TGAGATTGCTGTAAGCTTGGAAGCCCTTGAAAAACAATCTAGAAGCCCTTGAAAAACAAT
CTAGTTAggagttcccactgtgcctcagtggtaacaaaccggctagtatccatgaggact
tgggttcaatccctggcctcgctcagtgggttaaggatccagtgttgccatgggctgtgg
tgtaggttgcagatgcggcttggatcctgtgtggctgtggtgtaggctggcagttacagc
accgattcgacccctagcctgngaactttcatatgctatgggtgtggccctANNAAGACA
AAAAAGAAAAGAAAAGAAAAACAATCTAGTCAGATACCAAGAGTGAAACTCAGAAGCGAC
ATGACTAAGATCACACTGCTTATTAATGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TACCAAGAAAAACCCTTCATTTGCTTTACATCTGGCATATTGCTTTATGCAGTTGGCCAG
AACTTTTGCACATGGCCCTCTGCATTTGTCCTAAGGTAATTAATGGCTTTGCAATATTTG
ATCAGCAGCAGCATGGACACAAAGAGAAGTTGTGCAACCAACACAGACCACACAGTCTTT
TAAATGAAAACCTTTTGCATTAAAACACTCAGGCGTTCTGCAAGGATAAGTGTTTCCATG
CCACAAAGGAAAAAAGGGGGGGGCACACTGAAGCCCCTGGGAAGACACCCAAAACTTGAT
TCTTGATTAAGTCTATATCTCTCCAATAAAACTACCTAACTCTTCAAAGGAAGTAAAATG
TGAGATTGCTGTAAGCTTGGAAGCCCTTGAAAAACAATCTAGAAGCCCTTGAAAAACAAT
CTAGTTAggagttcccactgtgcctcagtggtaacaaaccggctagtatccatgaggact
tgggttcaatccctggcctcgctcagtgggttaaggatccagtgttgccatgggctgtgg
tgtaggttgcagatgcggcttggatcctgtgtggctgtggtgtaggctggcagttacagc
accgattcgacccctagcctgngaactttcatatgctatgggtgtggccctANNAAGACA
AAAAAGAAAAGAAAAGAAAAACAATCTAGTCAGATACCAAGAGTGAAACTCAGAAGCGAC
ATGACTAAGATCACACTGCTTATTAATGG

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               3-119, - strand, RNAz p=0.653242

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               3-119, - strand, RNAz p=0.653242

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               3-402, gnl|bosTau2|chr5 (38021476-38021071)
               

               
               3-402, gnl|Hg17|chr12 (101364644-101364242)
               

               
               3-402, gnl|Mm7|chr10 (87430715-87431124)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-402, gnl|bosTau2|chr5 (38021476-38021071)
               

               
               3-402, gnl|Hg17|chr12 (101364644-101364242)
               

               
               3-402, gnl|Mm7|chr10 (87430715-87431124)

	3-402, gnl\|bosTau2\|chr5 (38021476-38021071)
	3-402, gnl\|Hg17\|chr12 (101364644-101364242)
	3-402, gnl\|Mm7\|chr10 (87430715-87431124)