Non-Coding RNA Search

Utr1-UTR010007E04

Sequence:


               
               CGTTTATTTATTTTCATCCCACTTATATGTAGCCATTATGGATAACCCTTTAACCTAAAG
ATAAATGGAAACCTTTTCCTTCACTTTTTCCCTGTGATGTTTGGGAAGAAAGCTCTTAGG
ATTTGTAGGAGAGAGGAGCTAGACTATCCATTTTATACTAGACTTAAGTTCTTAATTTGC
TAATGAGACCTTGGCTAATTTCTTCACCTATAGCCTGTTTTCTCATTTTTAGAGTTGTGG
TAAGGATTGCCAAGGACATAAGTGTAAAAAAATTCAGTAATTGTCAGTTCTTTCACTTTC
CCTTTTTCCCTGGTAATAAACTGCTAAGGCCTTAGATAAACAGGGACAGCTCATGACAGC
AGATATGTAATTCTGTGATGACTGCCAGGCACTAGAGAAGCACCCCATGTCCCAGAAACA
CTGGTTTAGGTGGCACCTCCTAGTAAATAGTGTTGGAGTAGGGAAACCAGCTTATCCACT
CCTTAGAACCCAGTTATGCACTTGATCCAGTTAATTTCATCTGCTAGTTCACAAAATAGT
TTTGGGCTGAGGCATTACCATTAAGTAATGTAATTGGAAGACAGAAACTTAACTCTTGAA
ACAACTTAATACCTCACATTTGTATAACATTCATTATCTCACCTGACCCTCACAGCAGCT
CTCGGGTTAGTCTGGGCTGGTGGTATTTGCATCTTATAGATGAGAATGTGGCAGTGACTT
ACTGCCATCGTTGGCTAGTGGCAGAGCCTGGACTGGGACTGTTTTCTGAACCCTATTCTA
TCCTACACAGCTCTGCTTCTTCCCTCTTTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CGTTTATTTATTTTCATCCCACTTATATGTAGCCATTATGGATAACCCTTTAACCTAAAG
ATAAATGGAAACCTTTTCCTTCACTTTTTCCCTGTGATGTTTGGGAAGAAAGCTCTTAGG
ATTTGTAGGAGAGAGGAGCTAGACTATCCATTTTATACTAGACTTAAGTTCTTAATTTGC
TAATGAGACCTTGGCTAATTTCTTCACCTATAGCCTGTTTTCTCATTTTTAGAGTTGTGG
TAAGGATTGCCAAGGACATAAGTGTAAAAAAATTCAGTAATTGTCAGTTCTTTCACTTTC
CCTTTTTCCCTGGTAATAAACTGCTAAGGCCTTAGATAAACAGGGACAGCTCATGACAGC
AGATATGTAATTCTGTGATGACTGCCAGGCACTAGAGAAGCACCCCATGTCCCAGAAACA
CTGGTTTAGGTGGCACCTCCTAGTAAATAGTGTTGGAGTAGGGAAACCAGCTTATCCACT
CCTTAGAACCCAGTTATGCACTTGATCCAGTTAATTTCATCTGCTAGTTCACAAAATAGT
TTTGGGCTGAGGCATTACCATTAAGTAATGTAATTGGAAGACAGAAACTTAACTCTTGAA
ACAACTTAATACCTCACATTTGTATAACATTCATTATCTCACCTGACCCTCACAGCAGCT
CTCGGGTTAGTCTGGGCTGGTGGTATTTGCATCTTATAGATGAGAATGTGGCAGTGACTT
ACTGCCATCGTTGGCTAGTGGCAGAGCCTGGACTGGGACTGTTTTCTGAACCCTATTCTA
TCCTACACAGCTCTGCTTCTTCCCTCTTTG

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               690-808, - strand, RNAz p=0.682151

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               690-808, - strand, RNAz p=0.682151

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               22-808, gnl|bosTau2|chr15 (50906416-50907220)
               

               
               22-808, gnl|Hg17|chr11 (57310842-57311779)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               22-808, gnl|bosTau2|chr15 (50906416-50907220)
               

               
               22-808, gnl|Hg17|chr11 (57310842-57311779)

	22-808, gnl\|bosTau2\|chr15 (50906416-50907220)
	22-808, gnl\|Hg17\|chr11 (57310842-57311779)