Non-Coding RNA Search

Utr1-UTR010009B11

Sequence:


               
               TTTGGTCTACTCTGTTGACAGTGAAACTCTGTCTTTTGTTTTTTGTTCCTTTCTATTTGT
GTAAAAGTTTTTATAGACAGAAAGGTTGCAGGTTTCCAGCAAGTGGGGATGGTGGGTGGA
AATTAGATCCTGGTATTTCTCCTTACTGCTCCCTTGTTGGAGCATATGATGCTTAATTGC
TTAGCGTTTGGTTTGGTTTGGTTTTGTTTTTCCAATGAGATTGTTAATCTTATAAACCAT
GAATCATCCACTGTTTTGTAAGGAACTGTTGTTGCTTTGTTTGAACCTGTGATAGATTCT
CTTCCAACCCTAAAGACTGGATAATTCCCCTAACAACTGGGAGGAAAAGCAGTAAGCCGC
CTGTGTTTTCTCCAGACAGTTTCTCCCTTGTCCCAGCCCTGGCTTTCCTCCCACGTTCTG
TACACCTCAGGGGGCCGAGAGGGGCTCCATGGTCTGGGGCTAGACTGGCCGTGTGGACAG
AAGCCAGCTGCTTCACGGGTCTCTCAGGCAGTTGTCCTTGGAATGGATGGCATTGCCACC
AGAAAACCTGGGCTGGACTGGGCTGGTGGCCTGGCGGGTCGCTGAATGTGGCTAGAGTCC
AGCCAAGAGCGAGAGTATAATAGGACTCTCACTGGCCTGTTCCTGTCTTCTGTGCTAAAA
AGGTGACTTTCAGAATAAGTGTAATCTTCTGAAAACCAGCCCAAAGGATCTTTCTGAGGC
AGTGGTTAAGCCCTCACGCCGCGAGGGCCAGTCTGTCTTGGGAGCTGGCAGCGAGAGTGT
GGCTTCTGCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTGGTCTACTCTGTTGACAGTGAAACTCTGTCTTTTGTTTTTTGTTCCTTTCTATTTGT
GTAAAAGTTTTTATAGACAGAAAGGTTGCAGGTTTCCAGCAAGTGGGGATGGTGGGTGGA
AATTAGATCCTGGTATTTCTCCTTACTGCTCCCTTGTTGGAGCATATGATGCTTAATTGC
TTAGCGTTTGGTTTGGTTTGGTTTTGTTTTTCCAATGAGATTGTTAATCTTATAAACCAT
GAATCATCCACTGTTTTGTAAGGAACTGTTGTTGCTTTGTTTGAACCTGTGATAGATTCT
CTTCCAACCCTAAAGACTGGATAATTCCCCTAACAACTGGGAGGAAAAGCAGTAAGCCGC
CTGTGTTTTCTCCAGACAGTTTCTCCCTTGTCCCAGCCCTGGCTTTCCTCCCACGTTCTG
TACACCTCAGGGGGCCGAGAGGGGCTCCATGGTCTGGGGCTAGACTGGCCGTGTGGACAG
AAGCCAGCTGCTTCACGGGTCTCTCAGGCAGTTGTCCTTGGAATGGATGGCATTGCCACC
AGAAAACCTGGGCTGGACTGGGCTGGTGGCCTGGCGGGTCGCTGAATGTGGCTAGAGTCC
AGCCAAGAGCGAGAGTATAATAGGACTCTCACTGGCCTGTTCCTGTCTTCTGTGCTAAAA
AGGTGACTTTCAGAATAAGTGTAATCTTCTGAAAACCAGCCCAAAGGATCTTTCTGAGGC
AGTGGTTAAGCCCTCACGCCGCGAGGGCCAGTCTGTCTTGGGAGCTGGCAGCGAGAGTGT
GGCTTCTGCT

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               1-106, + strand, RNAz p=0.961696

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               1-106, + strand, RNAz p=0.961696

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-459, gnl|bosTau2|chr9 (55953928-55953474)
               

               
               1-459, gnl|Hg17|chr6 (159178510-159178028)
               

               
               1-459, gnl|Mm7|chr17 (6295715-6295280)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-459, gnl|bosTau2|chr9 (55953928-55953474)
               

               
               1-459, gnl|Hg17|chr6 (159178510-159178028)
               

               
               1-459, gnl|Mm7|chr17 (6295715-6295280)

	1-459, gnl\|bosTau2\|chr9 (55953928-55953474)
	1-459, gnl\|Hg17\|chr6 (159178510-159178028)
	1-459, gnl\|Mm7\|chr17 (6295715-6295280)