Non-Coding RNA Search

Utr1-UTR010009C05

Sequence:


               
               ATTGGTTGTCCTTGGAGTTTGGTTTTGTAACCTTGAGGCATTTGCAGGCTTGAGATTTTG
GTTTGCTTCCATAGGCTGCCACAGCATTAGAGCCTAGGGGCCTCCTGGTTTAATCAATGT
AACTGTACATAAACTGGAAATCTGGGGTATAGTCAAAATTACCTTTGGGGAAAAAACCCC
CTCAAGGCAGTGTTAGAAATGGATGTTTTATCACTTAAGTTTAATGTGACCGTTTTTTCT
CCTCCAATGTGAGAGTGTTTGTTTTGTCTGAGTTCCTTCTTTGTCCTTGGCTTAGGTGTA
GGGGGAAGGCTTTATGGAAAGTATGTCTTCTAAAACTCCAGAATTGTGCTCAGCGGAGGG
TTGTTGATACCATGAGAGATGGCCTTTCTCCTTGTTTCAGCAGCTGCCTTTCTTGCGCTT
GACTTGGGTGCGTGTGTGTGTATGCACACATGTGCGTTCAGAGGGCCTGAGTCAAGGGCT
CTACCTTTATTCTCTCTCATCACCTAACCTGGTAGAGAACTGGCAGACTGTTTTACAAAG
AATAATCCCAGTATCTCTTGATTCTGACTAACTGAAGTGTTAAATGCATATTCAACTCAG
ATCTCCAAATTCTGTTTTTGTCAACAGGGTGCTTGTGGGGGCTCCACGGGCAGTAGCCCT
TCCCCTGCAGAAGGCCAACAGAACAGGAGGCTTGTACAGCTGTGACATCACCTCCCGGGG
GCCTTGCACACGGATTGAATTTGATAATGATGGTATGTTCATCTGTACTCGCTCAAGTGT
TCCTTTGGCCAGCTTGTCTGTACCCCACTTGTCCTTTCTAGGAGGAAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATTGGTTGTCCTTGGAGTTTGGTTTTGTAACCTTGAGGCATTTGCAGGCTTGAGATTTTG
GTTTGCTTCCATAGGCTGCCACAGCATTAGAGCCTAGGGGCCTCCTGGTTTAATCAATGT
AACTGTACATAAACTGGAAATCTGGGGTATAGTCAAAATTACCTTTGGGGAAAAAACCCC
CTCAAGGCAGTGTTAGAAATGGATGTTTTATCACTTAAGTTTAATGTGACCGTTTTTTCT
CCTCCAATGTGAGAGTGTTTGTTTTGTCTGAGTTCCTTCTTTGTCCTTGGCTTAGGTGTA
GGGGGAAGGCTTTATGGAAAGTATGTCTTCTAAAACTCCAGAATTGTGCTCAGCGGAGGG
TTGTTGATACCATGAGAGATGGCCTTTCTCCTTGTTTCAGCAGCTGCCTTTCTTGCGCTT
GACTTGGGTGCGTGTGTGTGTATGCACACATGTGCGTTCAGAGGGCCTGAGTCAAGGGCT
CTACCTTTATTCTCTCTCATCACCTAACCTGGTAGAGAACTGGCAGACTGTTTTACAAAG
AATAATCCCAGTATCTCTTGATTCTGACTAACTGAAGTGTTAAATGCATATTCAACTCAG
ATCTCCAAATTCTGTTTTTGTCAACAGGGTGCTTGTGGGGGCTCCACGGGCAGTAGCCCT
TCCCCTGCAGAAGGCCAACAGAACAGGAGGCTTGTACAGCTGTGACATCACCTCCCGGGG
GCCTTGCACACGGATTGAATTTGATAATGATGGTATGTTCATCTGTACTCGCTCAAGTGT
TCCTTTGGCCAGCTTGTCTGTACCCCACTTGTCCTTTCTAGGAGGAAG

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|13992589|emb|CAC38095.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|13992589|emb|CAC38095.1|

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               1-224, + strand, RNAz p=0.928156

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               1-224, + strand, RNAz p=0.928156

Aligned organism(s): 4 entry(ies)

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Aligned organism(s): 4 entry(ies)

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               1-441, gnl|bosTau2|chr2 (17184666-17184210)
               


               
               468-791, gnl|bosTau2|chr2 (17184212-17183894)
               

               
               468-791, gnl|Hg17|chr2 (173155593-173155935)
               

               
               468-791, gnl|Mm7|chr2 (71660188-71660495)

Aligned organism(s): 4 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-441, gnl|bosTau2|chr2 (17184666-17184210)
               


               
               468-791, gnl|bosTau2|chr2 (17184212-17183894)
               

               
               468-791, gnl|Hg17|chr2 (173155593-173155935)
               

               
               468-791, gnl|Mm7|chr2 (71660188-71660495)

	1-441, gnl\|bosTau2\|chr2 (17184666-17184210)

	468-791, gnl\|bosTau2\|chr2 (17184212-17183894)
	468-791, gnl\|Hg17\|chr2 (173155593-173155935)
	468-791, gnl\|Mm7\|chr2 (71660188-71660495)