Non-Coding RNA Search

Utr1-UTR010020C12

Sequence:


               
               AGAAAGTCCTTCTGCTGTCAGGGGCCAGTGATGAACTGTGGTGGCGGTTCACTTGGGACG
ATCAGCAGGTGCAGGTGGCAATTACAGCCTTCCCCAGGGCAAGCATATTGGAATTTCCAG
ACCACAGATGGAGGGAGATGAGACTTTATGTTTAATAAAAGGGAGGGTGAGTCTCTCTTT
ATTGTGACCAATACTGAAGGAGACTTCTAAAGGTCTTGAGTATCAGCTTATACTGGGGAA
GGCCACATCTTAGATCTGAGAATGGAGGAACTTTTTGGAGTTGCCTGTCACCACTGTGTG
AGCTGGGGCTTGGGAAGTAAGGCTCGGGCAGAGCCCCGTGAATTCTGTCCACAACACAAA
GCTCTTGCTACTTTCCTCACAGCCAACCTGCCCCCAACTCTGGCCAAATCTCAGGTGAGC
AGTGTGCGTAAGAACCTCAAGTTGCACCTGTTGAGTGTGCTGAAGCACCCAGCCTCCTTG
GAGTTCCAGGCTCAGATCACCACCCTGCTGGTAGACCTGGGCACGCCTCAGGCGGAGATC
GCCCGCAACATGCCCAGCAGCAAGGACGCTCGCAAGCGGCCCCGAGATGACTCGGATTCC
ACGCTCAAGAAGATGAAGCTGGGTAAGCTGTGGAGCCAAGTCAGGCCTGGAAGGAGAAGG
TGGCAGGGACTGACCATATTTGAATTCTGTACAGGCAACCGTAAGCTTAATTTACATTAT
AAATTACATTGTGTGggagtttctgctgtggcacggtgggttaaggatctagcattgttt
ctgtggtgattcaggttcaatttccagcctggtgcattgggttaatgatc

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGAAAGTCCTTCTGCTGTCAGGGGCCAGTGATGAACTGTGGTGGCGGTTCACTTGGGACG
ATCAGCAGGTGCAGGTGGCAATTACAGCCTTCCCCAGGGCAAGCATATTGGAATTTCCAG
ACCACAGATGGAGGGAGATGAGACTTTATGTTTAATAAAAGGGAGGGTGAGTCTCTCTTT
ATTGTGACCAATACTGAAGGAGACTTCTAAAGGTCTTGAGTATCAGCTTATACTGGGGAA
GGCCACATCTTAGATCTGAGAATGGAGGAACTTTTTGGAGTTGCCTGTCACCACTGTGTG
AGCTGGGGCTTGGGAAGTAAGGCTCGGGCAGAGCCCCGTGAATTCTGTCCACAACACAAA
GCTCTTGCTACTTTCCTCACAGCCAACCTGCCCCCAACTCTGGCCAAATCTCAGGTGAGC
AGTGTGCGTAAGAACCTCAAGTTGCACCTGTTGAGTGTGCTGAAGCACCCAGCCTCCTTG
GAGTTCCAGGCTCAGATCACCACCCTGCTGGTAGACCTGGGCACGCCTCAGGCGGAGATC
GCCCGCAACATGCCCAGCAGCAAGGACGCTCGCAAGCGGCCCCGAGATGACTCGGATTCC
ACGCTCAAGAAGATGAAGCTGGGTAAGCTGTGGAGCCAAGTCAGGCCTGGAAGGAGAAGG
TGGCAGGGACTGACCATATTTGAATTCTGTACAGGCAACCGTAAGCTTAATTTACATTAT
AAATTACATTGTGTGggagtttctgctgtggcacggtgggttaaggatctagcattgttt
ctgtggtgattcaggttcaatttccagcctggtgcattgggttaatgatc

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               469-628, - strand, RNAz p=0.786586

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               469-628, - strand, RNAz p=0.786586

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               2-732, gnl|bosTau2|chr18 (38130975-38131703)
               

               
               2-732, gnl|Hg17|chr19 (51037975-51037237)
               

               
               2-732, gnl|Mm7|chr7 (16719887-16720511)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-732, gnl|bosTau2|chr18 (38130975-38131703)
               

               
               2-732, gnl|Hg17|chr19 (51037975-51037237)
               

               
               2-732, gnl|Mm7|chr7 (16719887-16720511)

	2-732, gnl\|bosTau2\|chr18 (38130975-38131703)
	2-732, gnl\|Hg17\|chr19 (51037975-51037237)
	2-732, gnl\|Mm7\|chr7 (16719887-16720511)