Non-Coding RNA Search

Utr1-UTR010025G11

Sequence:


               
               ATTGCTCATGACTCCTGTGTTTCTCATCTCTTTCAAATCAACATGTATGGAGAGTTCAAT
CTGGGGCAGAGAGAATGATAAGCAAGGAGCACGCCCAGCCTTCCCTGCAGGCTGGGGCTG
GTGAGGGCTGTTCCCTGGTAGGGGAGAATCTGCCCCACCCAGGGACCGAAAACTCCTGCG
TGCACCCCACGTGCAATGTGTCTGAAGGGCGCTCAGCTCTCCTGGCCCAGCCTACTCCCA
GGCTGGGGCATGGGCACAGGACATGGTGGGTGCCCAGCGAATGTTTGTTTGGTGAGTGAG
GGAATGAATGACTGAAAGGAGACTGGAAGCATGGCCTCAGCTTGGGGGCTGGGCTCTATT
CCTCCCTCAGGGCCCCCCACTGTGGCCCTAAACCTTGCCTGCCCTCCTCCTGCCCGGCTC
CCCCCAGCTTCAGCAGCGCTGGATGGCAGTGTAATGGGAACAGGCGGAGAGCTGGCGCTA
ACAATCGGGACATCTCCGGTCAGCCGGGGCCCATTGTGGTCTCTTCCTGCCTCTGCCGCC
CACTGGCGTTGCTGTTCTTTGTGTTTCTGCCTCCTGGGCGGCCAGCATCCCCCCCACAGC
GTGTCTTCCTGACCCACCCCGGTCTCTCAGGATGGCCTGGAAATGTCCAGCTGATTCTTG
GGTTCACCACTCACTCTGGGGTGCCCAGGTGCCCCATTTTGGAAACCCAGCTGCTTCGGT
TCAAGATGCTGGAACCGGGAGTTAGTTTCTATCAtggcgcagcagaaacgaatccgacta
ggaaccatgaggttgcaggttcgatccct

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATTGCTCATGACTCCTGTGTTTCTCATCTCTTTCAAATCAACATGTATGGAGAGTTCAAT
CTGGGGCAGAGAGAATGATAAGCAAGGAGCACGCCCAGCCTTCCCTGCAGGCTGGGGCTG
GTGAGGGCTGTTCCCTGGTAGGGGAGAATCTGCCCCACCCAGGGACCGAAAACTCCTGCG
TGCACCCCACGTGCAATGTGTCTGAAGGGCGCTCAGCTCTCCTGGCCCAGCCTACTCCCA
GGCTGGGGCATGGGCACAGGACATGGTGGGTGCCCAGCGAATGTTTGTTTGGTGAGTGAG
GGAATGAATGACTGAAAGGAGACTGGAAGCATGGCCTCAGCTTGGGGGCTGGGCTCTATT
CCTCCCTCAGGGCCCCCCACTGTGGCCCTAAACCTTGCCTGCCCTCCTCCTGCCCGGCTC
CCCCCAGCTTCAGCAGCGCTGGATGGCAGTGTAATGGGAACAGGCGGAGAGCTGGCGCTA
ACAATCGGGACATCTCCGGTCAGCCGGGGCCCATTGTGGTCTCTTCCTGCCTCTGCCGCC
CACTGGCGTTGCTGTTCTTTGTGTTTCTGCCTCCTGGGCGGCCAGCATCCCCCCCACAGC
GTGTCTTCCTGACCCACCCCGGTCTCTCAGGATGGCCTGGAAATGTCCAGCTGATTCTTG
GGTTCACCACTCACTCTGGGGTGCCCAGGTGCCCCATTTTGGAAACCCAGCTGCTTCGGT
TCAAGATGCTGGAACCGGGAGTTAGTTTCTATCAtggcgcagcagaaacgaatccgacta
ggaaccatgaggttgcaggttcgatccct

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               73-349, + strand, RNAz p=0.999709

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               73-349, + strand, RNAz p=0.999709

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-744, gnl|bosTau2|chr8 (52724841-52724109)
               

               
               1-744, gnl|Hg17|chr9 (113367388-113368122)
               

               
               1-744, gnl|Mm7|chr4 (62076754-62077472)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-744, gnl|bosTau2|chr8 (52724841-52724109)
               

               
               1-744, gnl|Hg17|chr9 (113367388-113368122)
               

               
               1-744, gnl|Mm7|chr4 (62076754-62077472)

	1-744, gnl\|bosTau2\|chr8 (52724841-52724109)
	1-744, gnl\|Hg17\|chr9 (113367388-113368122)
	1-744, gnl\|Mm7\|chr4 (62076754-62077472)