Non-Coding RNA Search

Utr1-UTR010028F01

Sequence:


               
               AAGAACGAAATAATTATGATTCTGTCTTAATTAGCATAGCTAATAAGCTGCAGAATTCAA
GTTCTCAGGTTGCCTTGAAGCTCTGAGTCATTAGGTAAGAACTCCGTTAAAGGAGTCCTG
TTCCTAGCTTTAATGAAGAGATGGTGCTGGATTTCGCTCCCTTTGATTTCCTGGGAATAT
GAATGTGAGAGAAAGTGAAAGTATTCTTTGTCTTTTCAAAGTCGATGAGATTGCTGGAGA
CTTGCCTGCATGCTAACGGAAGGGAGAGCATTCTCTGACCCTGTCAACTGAGGTGAGAGA
TTTCTCCCCAGTGGGAAGACATTAGGAAAACCTTAATCTATTTTTAACAAAATTATTTAA
AATGTTAGCACTCAGAGTATATTTGAATCTCATTTCACTGAAAAGTAGATTCACATTTTT
GTTCTGACTTTACTACTGTCAGCAATAGCAGTAAACATGTAAGGAATAATTTCTAAGGTA
TCTGAAATAAAATTATCCTCTCAAAAATGAGAAAGCTGACAAAAAATAAATAAATAAAAA
AATAAAggagttcccgttgtggcacagtggttaacgaatctgactaggaaccatgaggtg
tgggttcgatccctggccttgctcagtgggttaaggatccggtgttgccatgagccgtgg
tgtaggtcacagacgtgctcggatctggcattgctgtggctctggcgtaggccagtggct
acagctccggtttgacccctagcctgggaacctccacatgccacgggagcggccct

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAGAACGAAATAATTATGATTCTGTCTTAATTAGCATAGCTAATAAGCTGCAGAATTCAA
GTTCTCAGGTTGCCTTGAAGCTCTGAGTCATTAGGTAAGAACTCCGTTAAAGGAGTCCTG
TTCCTAGCTTTAATGAAGAGATGGTGCTGGATTTCGCTCCCTTTGATTTCCTGGGAATAT
GAATGTGAGAGAAAGTGAAAGTATTCTTTGTCTTTTCAAAGTCGATGAGATTGCTGGAGA
CTTGCCTGCATGCTAACGGAAGGGAGAGCATTCTCTGACCCTGTCAACTGAGGTGAGAGA
TTTCTCCCCAGTGGGAAGACATTAGGAAAACCTTAATCTATTTTTAACAAAATTATTTAA
AATGTTAGCACTCAGAGTATATTTGAATCTCATTTCACTGAAAAGTAGATTCACATTTTT
GTTCTGACTTTACTACTGTCAGCAATAGCAGTAAACATGTAAGGAATAATTTCTAAGGTA
TCTGAAATAAAATTATCCTCTCAAAAATGAGAAAGCTGACAAAAAATAAATAAATAAAAA
AATAAAggagttcccgttgtggcacagtggttaacgaatctgactaggaaccatgaggtg
tgggttcgatccctggccttgctcagtgggttaaggatccggtgttgccatgagccgtgg
tgtaggtcacagacgtgctcggatctggcattgctgtggctctggcgtaggccagtggct
acagctccggtttgacccctagcctgggaacctccacatgccacgggagcggccct

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               274-467, - strand, RNAz p=0.999693

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               274-467, - strand, RNAz p=0.999693

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-519, gnl|bosTau2|chr11 (80003386-80003911)
               

               
               1-519, gnl|Hg17|chr13 (35970861-35969941)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-519, gnl|bosTau2|chr11 (80003386-80003911)
               

               
               1-519, gnl|Hg17|chr13 (35970861-35969941)

	1-519, gnl\|bosTau2\|chr11 (80003386-80003911)
	1-519, gnl\|Hg17\|chr13 (35970861-35969941)