Non-Coding RNA Search

Utr1-UTR010029B10

Sequence:


               
               ATAGTTGGGTTTTAGTTAAATTTTAGGTCAGGAATTTGAAATGTAGGGCTGTCTTCACTG
CTCTTTGCAAAATGATTACTACTGGGCAGTGTTTGCTCTTGGCTGATGGGACCTCTTGTC
AGGGGTCTGTTTTTATCTTAGCACTGTCCACAGGCTGGCAGATGTGACCCAGGGTGTTTA
AGAGCATCTGGTAAGACAGGAGGGAATGGAAGGTAGGAAGACAGGGACAGAGCAAGGGAA
GAGGGAAGGGGGAAAAATCCTCCATTTAATTAAAGTGTTTGCAAGGGTTATGCTTCTTAC
CTGCTGTTTTTAGCTGGCAAGATCAGATTCTCCCCCTAGACATTGCTGGACATTGCTCAG
TCCCTGTGAGCCCAGATGGGAGCTTTCTTTTTGATGCATGAGTCATCACAGTGATTCAGT
GACTTACTCATCACTTACATGTAATGATTGCAGTGGGCACTGCTGAGAGTTGAGAGGAGC
TTCTCTCTGCCAGGGTGGTGAGTAGCTTTAATAGCAGATGTGGTGTGTTAATCTGGAACC
TGAGCAACTCCTTGCCTTCTACCTGGTGCCATTGTGGACTCAGACTCTGGACTCAGTGAT
GCAGAGGGTCCCATCACATCCAGGCATTTCTTGGCAGAGGAGGGAGCTGGCCCGGGATTT
TTGGGGGGTAAAAAAAAACAAAAAAACATGTATTATGTTTTCTggagttcccgtcgtggc
tcagtggaaatgaatctgactagtaaccatgaggacacaggtttgatccctggcctctct
cagtgggttgaggatccagcattgccatgagctgtTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATAGTTGGGTTTTAGTTAAATTTTAGGTCAGGAATTTGAAATGTAGGGCTGTCTTCACTG
CTCTTTGCAAAATGATTACTACTGGGCAGTGTTTGCTCTTGGCTGATGGGACCTCTTGTC
AGGGGTCTGTTTTTATCTTAGCACTGTCCACAGGCTGGCAGATGTGACCCAGGGTGTTTA
AGAGCATCTGGTAAGACAGGAGGGAATGGAAGGTAGGAAGACAGGGACAGAGCAAGGGAA
GAGGGAAGGGGGAAAAATCCTCCATTTAATTAAAGTGTTTGCAAGGGTTATGCTTCTTAC
CTGCTGTTTTTAGCTGGCAAGATCAGATTCTCCCCCTAGACATTGCTGGACATTGCTCAG
TCCCTGTGAGCCCAGATGGGAGCTTTCTTTTTGATGCATGAGTCATCACAGTGATTCAGT
GACTTACTCATCACTTACATGTAATGATTGCAGTGGGCACTGCTGAGAGTTGAGAGGAGC
TTCTCTCTGCCAGGGTGGTGAGTAGCTTTAATAGCAGATGTGGTGTGTTAATCTGGAACC
TGAGCAACTCCTTGCCTTCTACCTGGTGCCATTGTGGACTCAGACTCTGGACTCAGTGAT
GCAGAGGGTCCCATCACATCCAGGCATTTCTTGGCAGAGGAGGGAGCTGGCCCGGGATTT
TTGGGGGGTAAAAAAAAACAAAAAAACATGTATTATGTTTTCTggagttcccgtcgtggc
tcagtggaaatgaatctgactagtaaccatgaggacacaggtttgatccctggcctctct
cagtgggttgaggatccagcattgccatgagctgtTG

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               230-338, - strand, RNAz p=0.99571

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               230-338, - strand, RNAz p=0.99571

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-603, gnl|bosTau2|chr1 (57740022-57740613)
               

               
               1-603, gnl|Hg17|chr3 (134337667-134338244)
               

               
               1-603, gnl|Mm7|chr9 (103394950-103394386)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-603, gnl|bosTau2|chr1 (57740022-57740613)
               

               
               1-603, gnl|Hg17|chr3 (134337667-134338244)
               

               
               1-603, gnl|Mm7|chr9 (103394950-103394386)

	1-603, gnl\|bosTau2\|chr1 (57740022-57740613)
	1-603, gnl\|Hg17\|chr3 (134337667-134338244)
	1-603, gnl\|Mm7\|chr9 (103394950-103394386)