Non-Coding RNA Search

Utr1-UTR010030H04

Sequence:


               
               TTTGGAACTCTTCTTTGGCGGCGTTCATCCCAGTTTGCGGATATTTTGGTTCATCTTCCT
TCACTAGTCTGTCCGGCTCCGGGAGACAGGGAGGCCGTTTTATCTTTTCTTCCCCTGTAC
CCAGCAATTAACATGGTTATTGGCACGTGGAAGGCACTCCATACATTTTTGTTGAATGTT
AATGAATGAATGTGAATTAGAGGGATGGCTGGAGACCTGAAACGGTGTGTATTTGCAGCT
CTGCCTGTACATGTTGGTGGGGAGTTCTTCTCAGGTCTGCAAACTCCAAAGCTGAACCTG
GAGCTTCAGAAGTGAAGGGAAGACCCCTGAAAAGGGTCCCATTTGGCACCAAGGAGAGAA
AGCCTGTGAAATCGCATCATGCAGTTGCTTCACAAGGCAGTAACTGGTCTTCTTCCTCAG
ACCCCAACACCAGCGTTGTCTGAGAAGTGTCTCTAGGGCCACAGTGCAGGAGGGCAGGCA
GCATGTCAGGCATTAGGACAGCGTCCAGAAAAATAGCACAGATTTAGCTTAGAATCCCTG
GGTGGGTGGGGCCCTGAGAAAAGAGGCTTGGCTTTGTTCAAGTGAAATCTGATGAAATGT
GGAGAAACATTAGATCAGAGGCAGTGAGGGGTGCCCTGGCTGAAGCCCCCACTAGGACAG
TGACGGGGACAgtgagctgtggtgcaggccgcagacgcagctcagatcccgagttgctga
ggctgtggtgtaggctggaggctacagctcttattagacccctagcctgggaacctccat
atgctgtgggtgtagccctggaaaaAGGCAAAAAAAACA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTGGAACTCTTCTTTGGCGGCGTTCATCCCAGTTTGCGGATATTTTGGTTCATCTTCCT
TCACTAGTCTGTCCGGCTCCGGGAGACAGGGAGGCCGTTTTATCTTTTCTTCCCCTGTAC
CCAGCAATTAACATGGTTATTGGCACGTGGAAGGCACTCCATACATTTTTGTTGAATGTT
AATGAATGAATGTGAATTAGAGGGATGGCTGGAGACCTGAAACGGTGTGTATTTGCAGCT
CTGCCTGTACATGTTGGTGGGGAGTTCTTCTCAGGTCTGCAAACTCCAAAGCTGAACCTG
GAGCTTCAGAAGTGAAGGGAAGACCCCTGAAAAGGGTCCCATTTGGCACCAAGGAGAGAA
AGCCTGTGAAATCGCATCATGCAGTTGCTTCACAAGGCAGTAACTGGTCTTCTTCCTCAG
ACCCCAACACCAGCGTTGTCTGAGAAGTGTCTCTAGGGCCACAGTGCAGGAGGGCAGGCA
GCATGTCAGGCATTAGGACAGCGTCCAGAAAAATAGCACAGATTTAGCTTAGAATCCCTG
GGTGGGTGGGGCCCTGAGAAAAGAGGCTTGGCTTTGTTCAAGTGAAATCTGATGAAATGT
GGAGAAACATTAGATCAGAGGCAGTGAGGGGTGCCCTGGCTGAAGCCCCCACTAGGACAG
TGACGGGGACAgtgagctgtggtgcaggccgcagacgcagctcagatcccgagttgctga
ggctgtggtgtaggctggaggctacagctcttattagacccctagcctgggaacctccat
atgctgtgggtgtagccctggaaaaAGGCAAAAAAAACA

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               522-679, - strand, RNAz p=0.903372

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               522-679, - strand, RNAz p=0.903372

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               51-679, gnl|bosTau2|chr13 (57900421-57899795)
               

               
               51-679, gnl|Hg17|chr20 (47480751-47479930)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               51-679, gnl|bosTau2|chr13 (57900421-57899795)
               

               
               51-679, gnl|Hg17|chr20 (47480751-47479930)

	51-679, gnl\|bosTau2\|chr13 (57900421-57899795)
	51-679, gnl\|Hg17\|chr20 (47480751-47479930)