Non-Coding RNA Search

Utr1-UTR010034B01

Sequence:


               
               CATCTCATACACACTTTAATCCAGTCACCCCTCTTTATTCTGCCTCTAAGTTTAGACTTA
CTCTATAATTTGAGTTGGATTAATAGATGGTAAATACCTCCAGATTTACTTGATGTTTTC
TGCTTTTCTCTTTTCTCTCTTTGACCCTTCCTTCCCCTCCAACCGACTCCAGCTGAAAAA
AGGAAGGGTGGGCAGGCTGTGGATTCTAGCCTTCCTCTTCTAAGTGTATCTGATCCTTTC
ATTCCTCTTCAAGTACCTGATGCACCAGGTAGGTGAATAAAACTGATCCTAAGTTAAGTT
ACATCCCAGGGTCTCTTGAGAGCTCTGTTTTAAACACTCCGTGAATAGGATCTGAATTCC
AAGGCCTAATAATAGGTGCTGTTGTATATTTTTATTGTGTCTCAAGAAGAGGGGCAAAAT
TCTCTAGGAAAGCTAGTCCTTATTAGCAAAGATAATAAATTCAGCTCAATTATACCTGAT
TGTATTCCACATCACATCAGTGTTAAATTTCATATCCTAAACTGCATAAATGGAAATGCG
AAGGGCCTATATATTGCAAGGAACATCAGCCCAATATGATTATAACAATGGTGGTGGgga
gttcccagcgtggctcagtggttaacaaatccgtctaggaaccatgaggttgcgggtttg
gtccctgcccttgctcagtgggttaacgatccggcgttgcccgtgagctgtggtgtaggt
tgcagacgcggctcggatcccgcgttgctgtggctctggcgtaggccggtggctacagct
ccaattcgacccctagcctgggaacctccatatgccgcgggagcggcccaagaaatagCA
ACAACAACAACAACAACAAAAAAAGACAAAAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CATCTCATACACACTTTAATCCAGTCACCCCTCTTTATTCTGCCTCTAAGTTTAGACTTA
CTCTATAATTTGAGTTGGATTAATAGATGGTAAATACCTCCAGATTTACTTGATGTTTTC
TGCTTTTCTCTTTTCTCTCTTTGACCCTTCCTTCCCCTCCAACCGACTCCAGCTGAAAAA
AGGAAGGGTGGGCAGGCTGTGGATTCTAGCCTTCCTCTTCTAAGTGTATCTGATCCTTTC
ATTCCTCTTCAAGTACCTGATGCACCAGGTAGGTGAATAAAACTGATCCTAAGTTAAGTT
ACATCCCAGGGTCTCTTGAGAGCTCTGTTTTAAACACTCCGTGAATAGGATCTGAATTCC
AAGGCCTAATAATAGGTGCTGTTGTATATTTTTATTGTGTCTCAAGAAGAGGGGCAAAAT
TCTCTAGGAAAGCTAGTCCTTATTAGCAAAGATAATAAATTCAGCTCAATTATACCTGAT
TGTATTCCACATCACATCAGTGTTAAATTTCATATCCTAAACTGCATAAATGGAAATGCG
AAGGGCCTATATATTGCAAGGAACATCAGCCCAATATGATTATAACAATGGTGGTGGgga
gttcccagcgtggctcagtggttaacaaatccgtctaggaaccatgaggttgcgggtttg
gtccctgcccttgctcagtgggttaacgatccggcgttgcccgtgagctgtggtgtaggt
tgcagacgcggctcggatcccgcgttgctgtggctctggcgtaggccggtggctacagct
ccaattcgacccctagcctgggaacctccatatgccgcgggagcggcccaagaaatagCA
ACAACAACAACAACAACAAAAAAAGACAAAAG

Predicted RNA structure(s): 2 entry(ies)

More info

Predicted RNA structure(s): 2 entry(ies)

Help | Less info


               
               95-207, - strand, RNAz p=0.741906
               

               
               248-356, + strand, RNAz p=0.711511

Predicted RNA structure(s): 2 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               95-207, - strand, RNAz p=0.741906
               

               
               248-356, + strand, RNAz p=0.711511

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               19-599, gnl|bosTau2|chr11 (48846770-48847350)
               

               
               19-599, gnl|Hg17|chr2 (69635008-69634431)

Aligned organism(s): 2 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               19-599, gnl|bosTau2|chr11 (48846770-48847350)
               

               
               19-599, gnl|Hg17|chr2 (69635008-69634431)

	95-207, - strand, RNAz p=0.741906
	248-356, + strand, RNAz p=0.711511

	19-599, gnl\|bosTau2\|chr11 (48846770-48847350)
	19-599, gnl\|Hg17\|chr2 (69635008-69634431)