Non-Coding RNA Search

Utr1-UTR010034C03

Sequence:


               
               GAAAGCAGCTTGTGTGAACATTTGCAGCCCATACTTCTAACAGTGTACATATGTAGAAGT
GCCTTTGTAAAGAAGGCCCACACTCAAGCACAGTCCTCTTAATACTCTGCTGGGAATTAA
AGAACACAAGGTAATTTTTTAATAGCACACTGGTTACCTTTAGAGTGTAGTACTTTGGAT
AGTGACTGAGGCGGCCACTTACAGAGGAGCGACAACAACAACATACTCTATTATTTACTG
GGTGATTTTTGAGAGAAACAAGTTCTTCCTTGAAGACAAGCTTAGATATTTCAAGACCTC
CTCAAAAAATTTTTTCAGCACCTTCTGTGCTCCAAATCGAGGCAGTTTGCATCATGTTTC
AGTATAACTGAGCAACAGGCTGGCAAATTCCCTGCTTTCCTCTTCACCAAAATCCAAAAT
AGAACTCACAAAAACTCCCTCCTTCATCATCGCACCCCACAACAAACACCCCACCCGCGC
CCCCCCCCCAGGGAGAAACAGACCCTCCCCCCAAAAAAAACCCACCAACCAGTAAATAGA
GCCAGCCGAAAGACAAATTCCCAGCTGTAACTATAGCACTTTGCTCAGTGCTGTGAGCTT
GCTAGAGCTGGCACATTTTTTATAATACAGATGCATAAATGCACCATCTGAGGCAGAAGG
AATGCAGCACCCCCTTTGGCATTGCTCATCCAGAGCACATTGCATAGAAGTAGCCTCCCC
AGACCCAAGATAAAAGACTTGATTCACCATCTGACCATTCTTTTTTAGCATCACCCTGgg
catgcggaagttcctgagctggggattgaacccacaccacagcagtgacccaagccactg
tggtgacaatgccagatccttaaccactgagccacacgggaactcccTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAAAGCAGCTTGTGTGAACATTTGCAGCCCATACTTCTAACAGTGTACATATGTAGAAGT
GCCTTTGTAAAGAAGGCCCACACTCAAGCACAGTCCTCTTAATACTCTGCTGGGAATTAA
AGAACACAAGGTAATTTTTTAATAGCACACTGGTTACCTTTAGAGTGTAGTACTTTGGAT
AGTGACTGAGGCGGCCACTTACAGAGGAGCGACAACAACAACATACTCTATTATTTACTG
GGTGATTTTTGAGAGAAACAAGTTCTTCCTTGAAGACAAGCTTAGATATTTCAAGACCTC
CTCAAAAAATTTTTTCAGCACCTTCTGTGCTCCAAATCGAGGCAGTTTGCATCATGTTTC
AGTATAACTGAGCAACAGGCTGGCAAATTCCCTGCTTTCCTCTTCACCAAAATCCAAAAT
AGAACTCACAAAAACTCCCTCCTTCATCATCGCACCCCACAACAAACACCCCACCCGCGC
CCCCCCCCCAGGGAGAAACAGACCCTCCCCCCAAAAAAAACCCACCAACCAGTAAATAGA
GCCAGCCGAAAGACAAATTCCCAGCTGTAACTATAGCACTTTGCTCAGTGCTGTGAGCTT
GCTAGAGCTGGCACATTTTTTATAATACAGATGCATAAATGCACCATCTGAGGCAGAAGG
AATGCAGCACCCCCTTTGGCATTGCTCATCCAGAGCACATTGCATAGAAGTAGCCTCCCC
AGACCCAAGATAAAAGACTTGATTCACCATCTGACCATTCTTTTTTAGCATCACCCTGgg
catgcggaagttcctgagctggggattgaacccacaccacagcagtgacccaagccactg
tggtgacaatgccagatccttaaccactgagccacacgggaactcccTG

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               513-658, - strand, RNAz p=0.999112

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               513-658, - strand, RNAz p=0.999112

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               6-694, gnl|bosTau2|chr1 (33773777-33773078)
               

               
               6-694, gnl|Hg17|chr3 (115681090-115680434)
               

               
               6-694, gnl|Mm7|chr16 (43245704-43246543)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               6-694, gnl|bosTau2|chr1 (33773777-33773078)
               

               
               6-694, gnl|Hg17|chr3 (115681090-115680434)
               

               
               6-694, gnl|Mm7|chr16 (43245704-43246543)

	6-694, gnl\|bosTau2\|chr1 (33773777-33773078)
	6-694, gnl\|Hg17\|chr3 (115681090-115680434)
	6-694, gnl\|Mm7\|chr16 (43245704-43246543)