Non-Coding RNA Search

Utr1-UTR010036C02

Sequence:


               
               AAATACAGTCATATTGGTTAACATGGGTTGAGGAGCCAGGAGACCTGACCGGTGGGCTGA
TTCTCTTCCCAACTTTCTGTGCGGTCCTGGGTGGTTCTCACAACCTCTAGGGGTCTAGTT
TCCTCATCTACCTCATGCTAAAAGCTGGTTGTCTTATTGAAACCTCCCAAGGATGTTATG
AATTGGGGCAAAGAAAATTCCCCTTTTATAAATGGAAAAATTGAGGCTGAGAGAGAAGTT
AATTGCTCAAGGTCACCCAGGTGATAAGTGGCAGGGCCCGTATATTTACTTAAAGCCAAA
CTTCAGTGCCCAAGCTCTTATCTACCAAGTGATATATAATCCTGTATACCCTGCTTTTAC
CACCTCCACACACATATGCATCTCAGAGAGTTGTGAGTATCTCAGAGTTCCTGTTTGCAG
GAACTTGGGGTATCTGAACACTGAGGCCTATTTCAGAAGGATTGGCTTCTGAGTTTGGAT
TTCCACACAGCAGTTTGGCCCTGAGCCCTGTTAGGGGCTAGCTTTGACCTTCCCTCTCCT
CCTGTCCTCAGCTTGCCTCATCGGGCCCTCTTTGAACCTGTTGTTTGCTGGGCCTGGAGT
CCCAGAGTTGAACTGACCTCTGTGAGTTCACGGTTTAATGGGGGAGACACTGGTGATCAG
GCTTGCAGTGCACTGTGAAATGCTATGATGGAGAGGGCCCTCCCCAGGGGAACCGAGTGT
GCTTAGAGTGTGCAGGTGAGGAATAAGGCAGGGTGGTCAGAGGAGTCTTCTCTGAGAATG
GGACATTTGAGCTGGGCCCTTGACAGATGAATAGGAGTTCTGTAGGTGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAATACAGTCATATTGGTTAACATGGGTTGAGGAGCCAGGAGACCTGACCGGTGGGCTGA
TTCTCTTCCCAACTTTCTGTGCGGTCCTGGGTGGTTCTCACAACCTCTAGGGGTCTAGTT
TCCTCATCTACCTCATGCTAAAAGCTGGTTGTCTTATTGAAACCTCCCAAGGATGTTATG
AATTGGGGCAAAGAAAATTCCCCTTTTATAAATGGAAAAATTGAGGCTGAGAGAGAAGTT
AATTGCTCAAGGTCACCCAGGTGATAAGTGGCAGGGCCCGTATATTTACTTAAAGCCAAA
CTTCAGTGCCCAAGCTCTTATCTACCAAGTGATATATAATCCTGTATACCCTGCTTTTAC
CACCTCCACACACATATGCATCTCAGAGAGTTGTGAGTATCTCAGAGTTCCTGTTTGCAG
GAACTTGGGGTATCTGAACACTGAGGCCTATTTCAGAAGGATTGGCTTCTGAGTTTGGAT
TTCCACACAGCAGTTTGGCCCTGAGCCCTGTTAGGGGCTAGCTTTGACCTTCCCTCTCCT
CCTGTCCTCAGCTTGCCTCATCGGGCCCTCTTTGAACCTGTTGTTTGCTGGGCCTGGAGT
CCCAGAGTTGAACTGACCTCTGTGAGTTCACGGTTTAATGGGGGAGACACTGGTGATCAG
GCTTGCAGTGCACTGTGAAATGCTATGATGGAGAGGGCCCTCCCCAGGGGAACCGAGTGT
GCTTAGAGTGTGCAGGTGAGGAATAAGGCAGGGTGGTCAGAGGAGTCTTCTCTGAGAATG
GGACATTTGAGCTGGGCCCTTGACAGATGAATAGGAGTTCTGTAGGTGG

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               409-525, + strand, RNAz p=0.972603

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               409-525, + strand, RNAz p=0.972603

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               23-829, gnl|bosTau2|chr8 (40724657-40725477)
               

               
               23-829, gnl|Hg17|chr3 (12815604-12816432)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               23-829, gnl|bosTau2|chr8 (40724657-40725477)
               

               
               23-829, gnl|Hg17|chr3 (12815604-12816432)

	23-829, gnl\|bosTau2\|chr8 (40724657-40725477)
	23-829, gnl\|Hg17\|chr3 (12815604-12816432)