Non-Coding RNA Search

Utr1-UTR010039G05

Sequence:


               
               ATTTCCTTTCCCAAGGCCGAGAAAAAGTCACGAGCAAGGGGGGAAATGAGCAGAAGTGAG
TGAGGAAAGCTGCGGAGAGATTGCTCAGCTGACACAGGGGACCTGGGACGCCAGGGGGAC
GCGCGTGTCCTTTTTCTCTCTGCTCATGGTTGGGAGTTGCCGCTTTGATATAAGGATATC
TGGATCTGTGAACTTCACTGTGTCCAGTTAATTGAATTTATAATTCAGCACCCAAATGCT
GAAAAGAATTATCTTTTATGTTCCTTAATGAGTGCTATAAAAACAAGTGGCGAATCTAAT
TTTATGGATGATCCTTTATGACTTACCTGATAAGTAGTAGTTGTTCAACACAGAGGACGC
ATAACTCAGTCTGGGCCTCAGCTGGCAGCCTACAGTAAAAGCATGTTTTCAAGTGGCCGT
CTTGCTCCTCCTGAGTGGCCTGGAAGTCAGTGGTCCCACTGCCTCCTCTAGTAGAGCACG
AGGCCCAGGCTCCTCATTCGGGGGGATTGTGGAGAAGGGTCACCTGACTGGCCAGCCAAG
AACTCTCACCTCTTAGAACTGGCTCCTACCAGGAAGGGGGAGGGAAGAACATGGCAGCTG
ATCCCCGTTTCTGCTGGAGGAAATGGGGTCCACCTGGATGTTGCCAGCTGTGCTGGGGAA
GAGAATAGAAACACAGTGAAAATATACAGGGGATGTCAAAGAATTTCTTTTACCTTTGCC
CTACAACCAAGACAATGAACTTCAAAAAAACAAACAAACAAAAAATGGAggagcttccgt
catggctcagtggttagcaaatccgactaggaaccatgaggttgtgagttcgatccctgg
ccttgctcagtgggttaag

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATTTCCTTTCCCAAGGCCGAGAAAAAGTCACGAGCAAGGGGGGAAATGAGCAGAAGTGAG
TGAGGAAAGCTGCGGAGAGATTGCTCAGCTGACACAGGGGACCTGGGACGCCAGGGGGAC
GCGCGTGTCCTTTTTCTCTCTGCTCATGGTTGGGAGTTGCCGCTTTGATATAAGGATATC
TGGATCTGTGAACTTCACTGTGTCCAGTTAATTGAATTTATAATTCAGCACCCAAATGCT
GAAAAGAATTATCTTTTATGTTCCTTAATGAGTGCTATAAAAACAAGTGGCGAATCTAAT
TTTATGGATGATCCTTTATGACTTACCTGATAAGTAGTAGTTGTTCAACACAGAGGACGC
ATAACTCAGTCTGGGCCTCAGCTGGCAGCCTACAGTAAAAGCATGTTTTCAAGTGGCCGT
CTTGCTCCTCCTGAGTGGCCTGGAAGTCAGTGGTCCCACTGCCTCCTCTAGTAGAGCACG
AGGCCCAGGCTCCTCATTCGGGGGGATTGTGGAGAAGGGTCACCTGACTGGCCAGCCAAG
AACTCTCACCTCTTAGAACTGGCTCCTACCAGGAAGGGGGAGGGAAGAACATGGCAGCTG
ATCCCCGTTTCTGCTGGAGGAAATGGGGTCCACCTGGATGTTGCCAGCTGTGCTGGGGAA
GAGAATAGAAACACAGTGAAAATATACAGGGGATGTCAAAGAATTTCTTTTACCTTTGCC
CTACAACCAAGACAATGAACTTCAAAAAAACAAACAAACAAAAAATGGAggagcttccgt
catggctcagtggttagcaaatccgactaggaaccatgaggttgtgagttcgatccctgg
ccttgctcagtgggttaag

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               1-120, + strand, RNAz p=0.666547

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               1-120, + strand, RNAz p=0.666547

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-763, gnl|bosTau2|chr15 (10940066-10939314)
               

               
               1-763, gnl|Hg17|chr11 (113590795-113591543)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-763, gnl|bosTau2|chr15 (10940066-10939314)
               

               
               1-763, gnl|Hg17|chr11 (113590795-113591543)

	1-763, gnl\|bosTau2\|chr15 (10940066-10939314)
	1-763, gnl\|Hg17\|chr11 (113590795-113591543)