Utr1-UTR010042A02
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CGTTGGCAACGAAAGATACGTATTTGAAGCAGTCATTCGGTGGATAGCGCATGACACAGA AATAAGAAAGGTCCACATGAAGGACGTCATGTCAGCACTCTGGGTTTCAGGGTTGGACTC CAGCTACTTGCGGGAGCAGATGCTGAGTGAGCCGTTGGTCCGCGAGATCGTCAAGGAGTG CAGCAACATCCCGCTCAGCCAGCCGCAGCAGGGCGAGGCCATGCTCGCCAGCTTCAAGCC CCGGGGGTACTCGGAGTGCATCGTGACCATCGGTGGCGAAGAGCGGGTTTCACGGAAGCC AACAGCGGCGATGCGATGCATGTGCCCCCTTTACGACCCTAACAGGCAGCTTTGGATTGA ACTGGCCCCTTTAAGCATGCCGAGAATTAACCACGGAGTCCTCTCAGCAGAGGGATTTTT ATTTGTGTTTGGGGGCCAAGATGAAAATAAGCAGACCCTGAGCTCAGGAGAAAAGTATGA CCCAGATGCAAATACGTGGACTGCATTGCCACCAATGAACGAGGCAAGACACAACTTCGG AATCGTGGAGATAGACGGAATGCTGTACGTGCTGGGGGGAGAAGACGGTGAGAAAGAGCT CATCTCCATGGAGTGTTACGACACTTACTCTAAAACCTGGACAAAGCAGCCTGATTTGAC CATGGTTAGAAAGATCGGCTGCTATGCAGCTATGAAAAAGAAAATCTATGCCATGGGTGG AGGCTCCTATGGAAAACTCTTTGAGTCTGTGGAGTGTTATGACCCGAGGACCCAGCAGTG GACGGCGATCTGTCCCCTGA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CGTTGGCAACGAAAGATACGTATTTGAAGCAGTCATTCGGTGGATAGCGCATGACACAGA AATAAGAAAGGTCCACATGAAGGACGTCATGTCAGCACTCTGGGTTTCAGGGTTGGACTC CAGCTACTTGCGGGAGCAGATGCTGAGTGAGCCGTTGGTCCGCGAGATCGTCAAGGAGTG CAGCAACATCCCGCTCAGCCAGCCGCAGCAGGGCGAGGCCATGCTCGCCAGCTTCAAGCC CCGGGGGTACTCGGAGTGCATCGTGACCATCGGTGGCGAAGAGCGGGTTTCACGGAAGCC AACAGCGGCGATGCGATGCATGTGCCCCCTTTACGACCCTAACAGGCAGCTTTGGATTGA ACTGGCCCCTTTAAGCATGCCGAGAATTAACCACGGAGTCCTCTCAGCAGAGGGATTTTT ATTTGTGTTTGGGGGCCAAGATGAAAATAAGCAGACCCTGAGCTCAGGAGAAAAGTATGA CCCAGATGCAAATACGTGGACTGCATTGCCACCAATGAACGAGGCAAGACACAACTTCGG AATCGTGGAGATAGACGGAATGCTGTACGTGCTGGGGGGAGAAGACGGTGAGAAAGAGCT CATCTCCATGGAGTGTTACGACACTTACTCTAAAACCTGGACAAAGCAGCCTGATTTGAC CATGGTTAGAAAGATCGGCTGCTATGCAGCTATGAAAAAGAAAATCTATGCCATGGGTGG AGGCTCCTATGGAAAACTCTTTGAGTCTGTGGAGTGTTATGACCCGAGGACCCAGCAGTG GACGGCGATCTGTCCCCTGA |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 555-673, - strand, RNAz p=0.736322 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 555-673, - strand, RNAz p=0.736322 |
| Aligned organism(s): 37 entry(ies) | More info |
| Aligned organism(s): 37 entry(ies) | Help | Less info |
| 69-288, gnl|bosTau2|chr18 (7400440-7400221) | |
| 69-288, gnl|canFam2|chr5 (73553661-73553423) | |
| 69-288, gnl|danRer3|chr18 (12667777-12668015) | |
| 69-288, gnl|dasNov1|scaffold_1442 (70895-71121) | |
| 69-288, gnl|echTel1|scaffold_281617 (5914-6144) | |
| 69-288, gnl|fr1|chrUn (271684764-271684463) | |
| 69-288, gnl|galGal2|chrUn (130154302-130154539) | |
| 69-288, gnl|hg17|chr16 (79947879-79948117) | |
| 69-288, gnl|Hg17|chr16 (79947889-79948108) | |
| 69-288, gnl|loxAfr1|scaffold_17245 (56721-56483) | |
| 69-288, gnl|mm7|chr8 (115803757-115803996) | |
| 69-288, gnl|Mm7|chr8 (115803768-115803987) | |
| 69-288, gnl|monDom2|scaffold_1 (134182919-134182681) | |
| 69-288, gnl|oryCun1|scaffold_214249 (8265-8027) | |
| 69-288, gnl|panTro1|chr18 (74817703-74817941) | |
| 69-288, gnl|rheMac2|chr20 (79495961-79496199) | |
| 69-288, gnl|rn3|chr19 (47300749-47300988) | |
| 69-288, gnl|tetNig1|chrUn_random (105754410-105754699) | |
| 69-288, gnl|xenTro1|scaffold_1113 (182867-182640) | |
| 522-673, gnl|bosTau2|chr18 (7395956-7395805) | |
| 522-673, gnl|canFam2|chr5 (73548335-73548166) | |
| 522-673, gnl|dasNov1|scaffold_1442 (71355-71504) | |
| 522-673, gnl|echTel1|scaffold_32090 (1512-1681) | |
| 522-673, gnl|fr1|chrUn (271683788-271683631) | |
| 522-673, gnl|galGal2|chrUn (130156223-130156391) | |
| 522-673, gnl|hg17|chr16 (79954898-79955067) | |
| 522-673, gnl|Hg17|chr16 (79954898-79955049) | |
| 522-673, gnl|loxAfr1|scaffold_269 (174202-174033) | |
| 522-673, gnl|mm7|chr8 (115807609-115807778) | |
| 522-673, gnl|Mm7|chr8 (115807609-115807760) | |
| 522-673, gnl|monDom2|scaffold_1 (134172615-134172447) | |
| 522-673, gnl|oryCun1|scaffold_214249 (1225-1057) | |
| 522-673, gnl|panTro1|chr18 (74824719-74824889) | |
| 522-673, gnl|rheMac2|chr20 (79502723-79502892) | |
| 522-673, gnl|rn3|chr19 (47304779-47304956) | |
| 522-673, gnl|tetNig1|chrUn_random (105755258-105755421) | |
| 522-673, gnl|xenTro1|scaffold_1113 (171743-171584) |
| Aligned organism(s): 37 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 69-288, gnl|bosTau2|chr18 (7400440-7400221) | |
| 69-288, gnl|canFam2|chr5 (73553661-73553423) | |
| 69-288, gnl|danRer3|chr18 (12667777-12668015) | |
| 69-288, gnl|dasNov1|scaffold_1442 (70895-71121) | |
| 69-288, gnl|echTel1|scaffold_281617 (5914-6144) | |
| 69-288, gnl|fr1|chrUn (271684764-271684463) | |
| 69-288, gnl|galGal2|chrUn (130154302-130154539) | |
| 69-288, gnl|hg17|chr16 (79947879-79948117) | |
| 69-288, gnl|Hg17|chr16 (79947889-79948108) | |
| 69-288, gnl|loxAfr1|scaffold_17245 (56721-56483) | |
| 69-288, gnl|mm7|chr8 (115803757-115803996) | |
| 69-288, gnl|Mm7|chr8 (115803768-115803987) | |
| 69-288, gnl|monDom2|scaffold_1 (134182919-134182681) | |
| 69-288, gnl|oryCun1|scaffold_214249 (8265-8027) | |
| 69-288, gnl|panTro1|chr18 (74817703-74817941) | |
| 69-288, gnl|rheMac2|chr20 (79495961-79496199) | |
| 69-288, gnl|rn3|chr19 (47300749-47300988) | |
| 69-288, gnl|tetNig1|chrUn_random (105754410-105754699) | |
| 69-288, gnl|xenTro1|scaffold_1113 (182867-182640) | |
| 522-673, gnl|bosTau2|chr18 (7395956-7395805) | |
| 522-673, gnl|canFam2|chr5 (73548335-73548166) | |
| 522-673, gnl|dasNov1|scaffold_1442 (71355-71504) | |
| 522-673, gnl|echTel1|scaffold_32090 (1512-1681) | |
| 522-673, gnl|fr1|chrUn (271683788-271683631) | |
| 522-673, gnl|galGal2|chrUn (130156223-130156391) | |
| 522-673, gnl|hg17|chr16 (79954898-79955067) | |
| 522-673, gnl|Hg17|chr16 (79954898-79955049) | |
| 522-673, gnl|loxAfr1|scaffold_269 (174202-174033) | |
| 522-673, gnl|mm7|chr8 (115807609-115807778) | |
| 522-673, gnl|Mm7|chr8 (115807609-115807760) | |
| 522-673, gnl|monDom2|scaffold_1 (134172615-134172447) | |
| 522-673, gnl|oryCun1|scaffold_214249 (1225-1057) | |
| 522-673, gnl|panTro1|chr18 (74824719-74824889) | |
| 522-673, gnl|rheMac2|chr20 (79502723-79502892) | |
| 522-673, gnl|rn3|chr19 (47304779-47304956) | |
| 522-673, gnl|tetNig1|chrUn_random (105755258-105755421) | |
| 522-673, gnl|xenTro1|scaffold_1113 (171743-171584) |