Non-Coding RNA Search

Utr1-UTR010045E02

Sequence:


               
               TTTTCTTTTCTTTTCTCTTTCTTTCTTTTCTTTCTTTCTTCCTTTTTTCCTGTGCCCACA
ACATGCAaagttcccaggccagggattaaacccatgccacagtagtgacaacgctggatc
cttaaccattagaccaccagggaactccCTGAAATTTCATTTTTTATGAAAGCTGGTCAC
AATCTTACTGATTTCACAACCTATCGCACTGTGATCCAACTTATGGAAAGGGGCAGCCTA
AAGAATCATCCAGACTCTCAGCCATGGGCAAGCCTCTCACCATCTACCCTTCTGGCACCC
CCCTCATTCATTTTTAATAGTGACTACCCCAGGTAAAGTTCCTTTCTCTGGAGCTCTCTC
CTCTCCTTCCCTATATGGTTCAGAGAACTCTTATCCATCCTTTAAAACCCAGCTTTAAAG
TGACTCCTCTTCCCCTGTCTCCTTGAACAGAATTGCCTCTTCTGTCTTCTGGCCCCTAGA
GCATTTCAGTGACACTTGGTGATGGTCCCTCCTCCACTTCCAGCCTGTCCTAGGGCCAGC
TGCCCCAAGCCTACAAATACTTCCAGTGACTCTCTGAGGACGTTTAGGAAGACATTGAGC
AAATTAGCATCACGCAAATGATGGTACTGCGAATGAGCGGTGGCAGAGTTGGGGGGTGTT
GCAGGCAGGTTTCCTGTCTACGGAGCCACGTGCTGCAGAAAAAGGCTCCCTCCCCCTGTG
GCTGCAGTCTCCCCAGCATCCATCACAGGTACCATTTACACCGGAACTTGCCCGGTTCAT
TAGTGCGGTTCATTTGAGCTACTCTGGTTTCTTTTTGTTTTGTTTTGTTTTCTTCTACTT
T

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTTCTTTTCTTTTCTCTTTCTTTCTTTTCTTTCTTTCTTCCTTTTTTCCTGTGCCCACA
ACATGCAaagttcccaggccagggattaaacccatgccacagtagtgacaacgctggatc
cttaaccattagaccaccagggaactccCTGAAATTTCATTTTTTATGAAAGCTGGTCAC
AATCTTACTGATTTCACAACCTATCGCACTGTGATCCAACTTATGGAAAGGGGCAGCCTA
AAGAATCATCCAGACTCTCAGCCATGGGCAAGCCTCTCACCATCTACCCTTCTGGCACCC
CCCTCATTCATTTTTAATAGTGACTACCCCAGGTAAAGTTCCTTTCTCTGGAGCTCTCTC
CTCTCCTTCCCTATATGGTTCAGAGAACTCTTATCCATCCTTTAAAACCCAGCTTTAAAG
TGACTCCTCTTCCCCTGTCTCCTTGAACAGAATTGCCTCTTCTGTCTTCTGGCCCCTAGA
GCATTTCAGTGACACTTGGTGATGGTCCCTCCTCCACTTCCAGCCTGTCCTAGGGCCAGC
TGCCCCAAGCCTACAAATACTTCCAGTGACTCTCTGAGGACGTTTAGGAAGACATTGAGC
AAATTAGCATCACGCAAATGATGGTACTGCGAATGAGCGGTGGCAGAGTTGGGGGGTGTT
GCAGGCAGGTTTCCTGTCTACGGAGCCACGTGCTGCAGAAAAAGGCTCCCTCCCCCTGTG
GCTGCAGTCTCCCCAGCATCCATCACAGGTACCATTTACACCGGAACTTGCCCGGTTCAT
TAGTGCGGTTCATTTGAGCTACTCTGGTTTCTTTTTGTTTTGTTTTGTTTTCTTCTACTT
T

ncRNA annotation: 1 entry(ies)

Help | Less info


               
               143-71, tRNA Pseudo, RaveNnA Score=28.81

ncRNA annotation: 1 entry(ies)

Help | Less info

PigEST conread start position and end position of sequence/structure similarity to an annotated RNA family,
RNA family (possibly sequence identifier),
blast E-value (sequence sim.) or RaveNnA score (structure sim.)


               
               143-71, tRNA Pseudo, RaveNnA Score=28.81