Non-Coding RNA Search

Utr1-UTR010048H09

Sequence:


               
               CATTTAAAAAATGCTTCCTCAAATAAATTTTTTCAATGTGGCATAAAACATATTTGTTAA
TAGACCTAAATATTTTTGTCTAAAAATATTGTATATATATATTTATTTATTTATATAGCT
GGAATGCAAACTAGGAGCTCCTCTCTTATTTCTAATAAATATTTTTATAGTTCTGCTAAA
AGGTTTTCAAGTTAAGATCCAAATTTGTGCATATTTCCCAAACTGGGTTATAGAGAACAG
GGAGATATTTGAATATTGTCTCATCTCACTTATTCTTAAAAGAAGATGGAAAATAATTAG
CTTGCCTTGACTGGAAAAATGAATGTTAGGGAACCACGCTGCTGAATTCCATTTTGCTGT
CTGCTCTGGCTGAAAGCCATTTGAAAGCAGCTACCTCCCACTTCCTAGCTCTGCAGAACC
TCAGCGCTTTCACTGCAGAGAATGTCTCTTGTGGACCTTTGTGTTTCCCCAGATACCTTT
CTAAAGCCATTAGCTTTGCTAGCATTGTTATCTGTGAATTCCCCTGTTGGAATGAGGAAG
TATTTGAGCGTGTTTTTCTTTTTTTTTTTTTAGGTCCCTGATGATACCTTAGGTTTCAGA
GAGTAATAGAGCCATAAAGCACTAGTATTTTTTAAATTTGTTTTTATTTTTTTGTCTTTT
GATGGCTACAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CATTTAAAAAATGCTTCCTCAAATAAATTTTTTCAATGTGGCATAAAACATATTTGTTAA
TAGACCTAAATATTTTTGTCTAAAAATATTGTATATATATATTTATTTATTTATATAGCT
GGAATGCAAACTAGGAGCTCCTCTCTTATTTCTAATAAATATTTTTATAGTTCTGCTAAA
AGGTTTTCAAGTTAAGATCCAAATTTGTGCATATTTCCCAAACTGGGTTATAGAGAACAG
GGAGATATTTGAATATTGTCTCATCTCACTTATTCTTAAAAGAAGATGGAAAATAATTAG
CTTGCCTTGACTGGAAAAATGAATGTTAGGGAACCACGCTGCTGAATTCCATTTTGCTGT
CTGCTCTGGCTGAAAGCCATTTGAAAGCAGCTACCTCCCACTTCCTAGCTCTGCAGAACC
TCAGCGCTTTCACTGCAGAGAATGTCTCTTGTGGACCTTTGTGTTTCCCCAGATACCTTT
CTAAAGCCATTAGCTTTGCTAGCATTGTTATCTGTGAATTCCCCTGTTGGAATGAGGAAG
TATTTGAGCGTGTTTTTCTTTTTTTTTTTTTAGGTCCCTGATGATACCTTAGGTTTCAGA
GAGTAATAGAGCCATAAAGCACTAGTATTTTTTAAATTTGTTTTTATTTTTTTGTCTTTT
GATGGCTACAC

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               467-585, - strand, RNAz p=0.61819

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               467-585, - strand, RNAz p=0.61819

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               151-617, gnl|bosTau2|chr5 (22335850-22335395)
               

               
               151-617, gnl|Hg17|chr12 (47812763-47813497)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               151-617, gnl|bosTau2|chr5 (22335850-22335395)
               

               
               151-617, gnl|Hg17|chr12 (47812763-47813497)

	151-617, gnl\|bosTau2\|chr5 (22335850-22335395)
	151-617, gnl\|Hg17\|chr12 (47812763-47813497)