Non-Coding RNA Search

Utr1-UTR010049A11

Sequence:


               
               ATCATTATCAATTTGAGAGTTAAAAAACCAAATAGTTGGGAGTTACATGCAAACCCCCTT
TTTAGGTGGTATGAGGGAGAGATACAAAGAAACAGAAAACAGTTTTAGGCTTCCAGGAAT
TTACAGTCTGTTTGGACAGATAGATAACAAAATAACTGTAGCACAGTGCAGTAAATAAGT
ATCATGGTGGGTACCATAATTTCTACAGAAGTGGCTGTTTCGGTGTCTTTGTGTAGGTCT
TTGTGAGACTGTGTTATACCATGTGTGTATCTTCACTGCTAAACAGTCCTCTCTCCCACT
TATAAGCGATGAGGCTGTTGTTCCAGTAGCTTTGCCAAAATGCCAGGCCAAGCTGATAGT
CATATGCAGCCCAGAGAGAAGAGAGGGAGATTATCCCCCTGCCCCCACGTTGGCCCGTTA
GAGAAGGGAAATTTAGGGCTTTCCTGCCAACTTGACCCTGTTTACCAGCCAGCCTCCCAG
GTTCAAGCCAAGGCCTTTAATTTCATGTTACTACAGCAGCTGTGGAGGTTAAGTCAGTTT
GGGGATATTACCCAGACAGCAAATAGAGCCAGAACTGTTGTTTCTAATGGATGAAAATTA
TCATGATCTCTGCTGGATTCCCAGATAACAATGAAATTTCCAAATGCGCCCACTTGAGGG
AGCACAGAGATGGTTCTGAAGCTTTCTCTGTATTCAGAGCACTCTCATCTCAGACTGTCA
TGAACAAGGAAGCTTAAAAAACCAGCATCCTCTGGGCTGTAGCAGCCTTTGACTCACAAG
GGTGCTGAGAGGACCCAGGTCCCTATGTTCAAAACATTTATCCTGGAGTTCCCATCGTGG
CACAGTGGTTAAACAAACCCAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATCATTATCAATTTGAGAGTTAAAAAACCAAATAGTTGGGAGTTACATGCAAACCCCCTT
TTTAGGTGGTATGAGGGAGAGATACAAAGAAACAGAAAACAGTTTTAGGCTTCCAGGAAT
TTACAGTCTGTTTGGACAGATAGATAACAAAATAACTGTAGCACAGTGCAGTAAATAAGT
ATCATGGTGGGTACCATAATTTCTACAGAAGTGGCTGTTTCGGTGTCTTTGTGTAGGTCT
TTGTGAGACTGTGTTATACCATGTGTGTATCTTCACTGCTAAACAGTCCTCTCTCCCACT
TATAAGCGATGAGGCTGTTGTTCCAGTAGCTTTGCCAAAATGCCAGGCCAAGCTGATAGT
CATATGCAGCCCAGAGAGAAGAGAGGGAGATTATCCCCCTGCCCCCACGTTGGCCCGTTA
GAGAAGGGAAATTTAGGGCTTTCCTGCCAACTTGACCCTGTTTACCAGCCAGCCTCCCAG
GTTCAAGCCAAGGCCTTTAATTTCATGTTACTACAGCAGCTGTGGAGGTTAAGTCAGTTT
GGGGATATTACCCAGACAGCAAATAGAGCCAGAACTGTTGTTTCTAATGGATGAAAATTA
TCATGATCTCTGCTGGATTCCCAGATAACAATGAAATTTCCAAATGCGCCCACTTGAGGG
AGCACAGAGATGGTTCTGAAGCTTTCTCTGTATTCAGAGCACTCTCATCTCAGACTGTCA
TGAACAAGGAAGCTTAAAAAACCAGCATCCTCTGGGCTGTAGCAGCCTTTGACTCACAAG
GGTGCTGAGAGGACCCAGGTCCCTATGTTCAAAACATTTATCCTGGAGTTCCCATCGTGG
CACAGTGGTTAAACAAACCCAC

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               636-824, - strand, RNAz p=0.91614

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               636-824, - strand, RNAz p=0.91614

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-824, gnl|bosTau2|chr5 (22441305-22442130)
               

               
               1-824, gnl|Hg17|chr12 (47695506-47694696)
               

               
               1-824, gnl|Mm7|chr15 (98813090-98812365)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-824, gnl|bosTau2|chr5 (22441305-22442130)
               

               
               1-824, gnl|Hg17|chr12 (47695506-47694696)
               

               
               1-824, gnl|Mm7|chr15 (98813090-98812365)

	1-824, gnl\|bosTau2\|chr5 (22441305-22442130)
	1-824, gnl\|Hg17\|chr12 (47695506-47694696)
	1-824, gnl\|Mm7\|chr15 (98813090-98812365)