Non-Coding RNA Search

Utr1-UTR010049D07

Sequence:


               
               ATATATACGAAGGAGATGGAAACAGGAGTTTGAAGAGATAATGACTTTTTTTTTTTAACC
TGTTCCAGGAGAGAGCAAGGCTGGAATATTCAGGTGTTGAGAGAGCTATTGGAATTGAGA
GAAGGTGAACTTCTCATATTTTCCCCAGGGCCCAGGTGAAGTGGTCCTCAAGTGTCTGCC
TACGTTAACTCTTATTTCCTAATCTCCAAAATAAGCTGATTACTACCTGACCCATAAGTT
ATCTAAGAGTTTGCTTTGGAACGAGGGTAGTAGAATTTATCTCTGTATGATTGGCGGAGG
TTCTCCGTATGACTGTTTTAAGGATTCTGTTGGAAAGTAGTGGGTTTTTGGAGAGAAGAA
AGAGAATTGGATGGCTAGGGATTAGCCATTCCTACTCAGGGAACATAAGAAACTTTTGGA
GTTTTCCAAAGCTTGGAAAAGGATATTCCCCACTATAAATCATTACATTGACATTATATC
TTATAAATGAGTCTTAGGAGTTCATCGGTGGGGATTAGCTCTGTGTGCTCTAAAAAAATG
AGTCTCTGAATTTGCAGCATGGATAATTATACCTTAAGCCGTGTTAAGCCGTGTTAAACT
CACAAGCTCTATGGTCTTCATCTCTGTGGCCTTATCTTACCTATTTACACCTTTGACATT
ACTCAACGCTGGGCAATTATTCTATAGTGACATACATGTTGTTTCTGCCAGCTTTCTCAT
TGGCTAAATTAATGGTTAACTACATTCTATATATTTTTTTCAATAGTGAGTATGACACTT
TAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATATATACGAAGGAGATGGAAACAGGAGTTTGAAGAGATAATGACTTTTTTTTTTTAACC
TGTTCCAGGAGAGAGCAAGGCTGGAATATTCAGGTGTTGAGAGAGCTATTGGAATTGAGA
GAAGGTGAACTTCTCATATTTTCCCCAGGGCCCAGGTGAAGTGGTCCTCAAGTGTCTGCC
TACGTTAACTCTTATTTCCTAATCTCCAAAATAAGCTGATTACTACCTGACCCATAAGTT
ATCTAAGAGTTTGCTTTGGAACGAGGGTAGTAGAATTTATCTCTGTATGATTGGCGGAGG
TTCTCCGTATGACTGTTTTAAGGATTCTGTTGGAAAGTAGTGGGTTTTTGGAGAGAAGAA
AGAGAATTGGATGGCTAGGGATTAGCCATTCCTACTCAGGGAACATAAGAAACTTTTGGA
GTTTTCCAAAGCTTGGAAAAGGATATTCCCCACTATAAATCATTACATTGACATTATATC
TTATAAATGAGTCTTAGGAGTTCATCGGTGGGGATTAGCTCTGTGTGCTCTAAAAAAATG
AGTCTCTGAATTTGCAGCATGGATAATTATACCTTAAGCCGTGTTAAGCCGTGTTAAACT
CACAAGCTCTATGGTCTTCATCTCTGTGGCCTTATCTTACCTATTTACACCTTTGACATT
ACTCAACGCTGGGCAATTATTCTATAGTGACATACATGTTGTTTCTGCCAGCTTTCTCAT
TGGCTAAATTAATGGTTAACTACATTCTATATATTTTTTTCAATAGTGAGTATGACACTT
TAT

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               347-466, - strand, RNAz p=0.880784

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               347-466, - strand, RNAz p=0.880784

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               2-783, gnl|bosTau2|chr6 (20419819-20419027)
               

               
               2-783, gnl|Hg17|chr4 (22435682-22436418)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-783, gnl|bosTau2|chr6 (20419819-20419027)
               

               
               2-783, gnl|Hg17|chr4 (22435682-22436418)

	2-783, gnl\|bosTau2\|chr6 (20419819-20419027)
	2-783, gnl\|Hg17\|chr4 (22435682-22436418)