Non-Coding RNA Search

Utr1-UTR010051C09

Sequence:


               
               ACTTCCGGCCGCGGCGTGCGGACGGCCGTGCGGGCTTTGTCGGCTGGCCTGCGGGGCGGG
CGGTTGGCGCTCCGCGTGCAGGGTGCGTGCCGTCCTCTCGCCGCTGGGCGCCGGATTCCG
ACTGGTGACTAGACGGGGACACGCTGGAGCCTGAGCTGCTGAGCATGGGAACCTGCCCAA
GACGATGTCAGAAGCCCTGACCGTGAGGGAGCTCGCGGCCCCCGCATTTGCTGGGGGCGC
GGAACCCCGAATCCGGGGCCTGTTGGGAAGCCTGGAAGGGCGGGGCCTGCGGAGCTGCCG
CCCCCAGGAGGGGCGTGGCCAGCAGGCGGCCCCTCCCCGTGGGGAGATGCAAGCGGCCCC
GGCAGCGCAGGTGGGCCGCGCGGCGGGCGGAGACCCCGGCCTGAGCTCGGACCTCCTCCT
CCTGGAGAGCGAACTGGCCGAAGGCGAGGCCCGGCGCCGGGCCTGTGGCCGAAGCTTCCC
GTTTAGTCCGGAGTCCGGCTGGGACCAGCGAGGGCGGGCTGCGGGCGGGGAAGGGCTGCC
CGCGTGCAGCGGGTGCGGGCAGGACTTGCTTCTCCACCCGGAACAGAGGCCCCAGGCCGG
GGAGAGGCCGCTCAAGTGCGCTCAGTGTGGGAAGGCCTTCTGTCACAGCTCTGACCTGGC
TCGGCACCAGCGCGTTCACACCCGGGAGAGGCCCTTCGAGTGCAAGGAGTGTGGGAAAGG
CTTCAGCCAGAGCTCCCTGCTCATTCGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACTTCCGGCCGCGGCGTGCGGACGGCCGTGCGGGCTTTGTCGGCTGGCCTGCGGGGCGGG
CGGTTGGCGCTCCGCGTGCAGGGTGCGTGCCGTCCTCTCGCCGCTGGGCGCCGGATTCCG
ACTGGTGACTAGACGGGGACACGCTGGAGCCTGAGCTGCTGAGCATGGGAACCTGCCCAA
GACGATGTCAGAAGCCCTGACCGTGAGGGAGCTCGCGGCCCCCGCATTTGCTGGGGGCGC
GGAACCCCGAATCCGGGGCCTGTTGGGAAGCCTGGAAGGGCGGGGCCTGCGGAGCTGCCG
CCCCCAGGAGGGGCGTGGCCAGCAGGCGGCCCCTCCCCGTGGGGAGATGCAAGCGGCCCC
GGCAGCGCAGGTGGGCCGCGCGGCGGGCGGAGACCCCGGCCTGAGCTCGGACCTCCTCCT
CCTGGAGAGCGAACTGGCCGAAGGCGAGGCCCGGCGCCGGGCCTGTGGCCGAAGCTTCCC
GTTTAGTCCGGAGTCCGGCTGGGACCAGCGAGGGCGGGCTGCGGGCGGGGAAGGGCTGCC
CGCGTGCAGCGGGTGCGGGCAGGACTTGCTTCTCCACCCGGAACAGAGGCCCCAGGCCGG
GGAGAGGCCGCTCAAGTGCGCTCAGTGTGGGAAGGCCTTCTGTCACAGCTCTGACCTGGC
TCGGCACCAGCGCGTTCACACCCGGGAGAGGCCCTTCGAGTGCAAGGAGTGTGGGAAAGG
CTTCAGCCAGAGCTCCCTGCTCATTCGC

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               145-264, - strand, RNAz p=0.858202

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               145-264, - strand, RNAz p=0.858202

Predicted microRNA(s): 1 entry(ies)

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Predicted microRNA(s): 1 entry(ies)

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               209-401, - strand, RNAmicro p=0.9893

Predicted microRNA(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro


               
               209-401, - strand, RNAmicro p=0.9893

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               114-748, gnl|bosTau2|chr14 (679818-680455)
               

               
               114-748, gnl|Hg17|chr8 (144803210-144803857)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               114-748, gnl|bosTau2|chr14 (679818-680455)
               

               
               114-748, gnl|Hg17|chr8 (144803210-144803857)

	114-748, gnl\|bosTau2\|chr14 (679818-680455)
	114-748, gnl\|Hg17\|chr8 (144803210-144803857)