Non-Coding RNA Search

Utr1-UTR010053E12

Sequence:


               
               TCATCTCATCACACCTAACCTTTAAGTTACTTATTGAATAAATTACATTTAAGCATACCA
TTCCAAGGAGAACCCGTTACCATATGACCTGTCCATATGAGTTGTCTTTTTGATTTATAA
CGGCAATTGCTTTCTCGGCATGGATTTCATGACATAATAATATTCTATGAATTTTTGAAA
TTACAGTGAGCTTCACATCAATCATGTATAATAAAATACCATACGTATCAATGAGGGAGG
ACTATTGGAAGGTAGACATTTTAGAAATATGCACTTCTCCCAAATACCAATATCGTGATT
TTAATGCAATGGGCAGATTGCTTTTTTTAATATTCTTTAAATTGATCATAAAAATAGTCA
GCATCGTCACTCCCATTAGTGCACTATTCTATATTCTTAGCAGTTATCTTCTTTTCCTTG
AATGTGTTAACTGTCTGTCCAGCTAATTTTGCCTAGACCTCTATTGTTCTTGGCCTGAAT
TCAGGGAAATATATTCCTTCTGGAGTTCCTAGGCATTACTGTCTTAAATTTTAGGATTAT
AGTTAAACGCCTATGACATGGGCTACCATTATCTGCCCATGTTTCTTTTATCTGTAAGAA
TCAGAGAGATTTAAAGTGAGATCTTAACTATGTAAAGAGTTGAGTGTGCTGATGTTTTTC
TCCACTTTGTCTTCACACACTATTCCTGAAAATATCTTGAATTATAGTCTTTCCTGAGTA
AGTATTTATGCTATTCTATAAGGAAAAAAATTGTACCCGGCATTTGCTAACAGCGGCTGC
ATCACTTTTAACTTTAACTTAATTTTGTTCCTAGAATGCGAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCATCTCATCACACCTAACCTTTAAGTTACTTATTGAATAAATTACATTTAAGCATACCA
TTCCAAGGAGAACCCGTTACCATATGACCTGTCCATATGAGTTGTCTTTTTGATTTATAA
CGGCAATTGCTTTCTCGGCATGGATTTCATGACATAATAATATTCTATGAATTTTTGAAA
TTACAGTGAGCTTCACATCAATCATGTATAATAAAATACCATACGTATCAATGAGGGAGG
ACTATTGGAAGGTAGACATTTTAGAAATATGCACTTCTCCCAAATACCAATATCGTGATT
TTAATGCAATGGGCAGATTGCTTTTTTTAATATTCTTTAAATTGATCATAAAAATAGTCA
GCATCGTCACTCCCATTAGTGCACTATTCTATATTCTTAGCAGTTATCTTCTTTTCCTTG
AATGTGTTAACTGTCTGTCCAGCTAATTTTGCCTAGACCTCTATTGTTCTTGGCCTGAAT
TCAGGGAAATATATTCCTTCTGGAGTTCCTAGGCATTACTGTCTTAAATTTTAGGATTAT
AGTTAAACGCCTATGACATGGGCTACCATTATCTGCCCATGTTTCTTTTATCTGTAAGAA
TCAGAGAGATTTAAAGTGAGATCTTAACTATGTAAAGAGTTGAGTGTGCTGATGTTTTTC
TCCACTTTGTCTTCACACACTATTCCTGAAAATATCTTGAATTATAGTCTTTCCTGAGTA
AGTATTTATGCTATTCTATAAGGAAAAAAATTGTACCCGGCATTTGCTAACAGCGGCTGC
ATCACTTTTAACTTTAACTTAATTTTGTTCCTAGAATGCGAT

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               400-517, - strand, RNAz p=0.88278

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               400-517, - strand, RNAz p=0.88278

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-816, gnl|bosTau2|chr12 (23618766-23617945)
               

               
               1-816, gnl|Hg17|chr13 (71139924-71138799)
               

               
               1-816, gnl|Mm7|chr14 (92359236-92358545)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-816, gnl|bosTau2|chr12 (23618766-23617945)
               

               
               1-816, gnl|Hg17|chr13 (71139924-71138799)
               

               
               1-816, gnl|Mm7|chr14 (92359236-92358545)

	1-816, gnl\|bosTau2\|chr12 (23618766-23617945)
	1-816, gnl\|Hg17\|chr13 (71139924-71138799)
	1-816, gnl\|Mm7\|chr14 (92359236-92358545)