Non-Coding RNA Search

Utr1-UTR010053F07

Sequence:


               
               AAAGGCTCGCAGTGAACGCTTCTCAAGTGACTGTTTCCTTGGAGCCTGGCTTGACCAATG
GCAGAACTCTTCCCATTACCCACAATGAGCAGCTGGACCTGGAGCCCAGTGCTTCTGAGT
CTAAAGCTGTCGTTCCGACAAATGGGGTGCTCTAAAAAGAGTGATCTCAGTGACAAAATA
GCATGAACTGTATTTTGTTATTCTTTTTACGTGAGGTTTTTGAGTTTTCACTCGGTTAAT
GGGAAAAAGAGGCTTATTTCCAGCAATCCTGATTGGATTTTTAAAAAATCACCAGTGATT
GGGAGAGAAAGGACCCCTTACCTGACACATGGGGAATGCTCCCGGTAACAATTTTAACCC
CTTCTGAGGCAATTTCTCTTCTTCTTTTCATTTGAGTGTTGTATTATTTTATTGCCTCTT
GAATCTGACATATTTGGCTCAAGACCCAGGAATCTGGAGAAATATGCTTGAGATTTCTGG
TTTAATTAAACAAACAAAAGACCTCATTAACAAAAGCTGGCCATAGCCTCAGATGGAAAA
AAAAGAAAAAGTTCACTCGCTTGAGTTTGTCAACTGGCACAAGTAAATGTAAAATGAACT
GTTTTGCTTTTTTTTCAAAAAAATATTTTCCTTTAAACTATAGGATTTCGTAATAATAAC
TAACTAATAACCTTTCTTGTAGCCAGCCGGGGTTGGAGAACACTCACCGGGCCTCACAGC
CTTCCCTTGTACAGGGTCTGGCAGCCCTTTTGTAGTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAAGGCTCGCAGTGAACGCTTCTCAAGTGACTGTTTCCTTGGAGCCTGGCTTGACCAATG
GCAGAACTCTTCCCATTACCCACAATGAGCAGCTGGACCTGGAGCCCAGTGCTTCTGAGT
CTAAAGCTGTCGTTCCGACAAATGGGGTGCTCTAAAAAGAGTGATCTCAGTGACAAAATA
GCATGAACTGTATTTTGTTATTCTTTTTACGTGAGGTTTTTGAGTTTTCACTCGGTTAAT
GGGAAAAAGAGGCTTATTTCCAGCAATCCTGATTGGATTTTTAAAAAATCACCAGTGATT
GGGAGAGAAAGGACCCCTTACCTGACACATGGGGAATGCTCCCGGTAACAATTTTAACCC
CTTCTGAGGCAATTTCTCTTCTTCTTTTCATTTGAGTGTTGTATTATTTTATTGCCTCTT
GAATCTGACATATTTGGCTCAAGACCCAGGAATCTGGAGAAATATGCTTGAGATTTCTGG
TTTAATTAAACAAACAAAAGACCTCATTAACAAAAGCTGGCCATAGCCTCAGATGGAAAA
AAAAGAAAAAGTTCACTCGCTTGAGTTTGTCAACTGGCACAAGTAAATGTAAAATGAACT
GTTTTGCTTTTTTTTCAAAAAAATATTTTCCTTTAAACTATAGGATTTCGTAATAATAAC
TAACTAATAACCTTTCTTGTAGCCAGCCGGGGTTGGAGAACACTCACCGGGCCTCACAGC
CTTCCCTTGTACAGGGTCTGGCAGCCCTTTTGTAGTG

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               367-563, + strand, RNAz p=0.996681

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               367-563, + strand, RNAz p=0.996681

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-598, gnl|bosTau2|chr26 (33270826-33271445)
               

               
               1-598, gnl|Hg17|chr10 (127561030-127560113)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-598, gnl|bosTau2|chr26 (33270826-33271445)
               

               
               1-598, gnl|Hg17|chr10 (127561030-127560113)

	1-598, gnl\|bosTau2\|chr26 (33270826-33271445)
	1-598, gnl\|Hg17\|chr10 (127561030-127560113)