Non-Coding RNA Search

Utr1-UTR010056A12

Sequence:


               
               TTACCATGATGAGTGAGGTGTGTGTTAGCAAACCCAGCCCCAGGGCCTCCTTCCCTAGCT
CCTGTCCTGGGGAAAGAGAGGCTGGGCCTGAGGCGGTCATCCACACAGAGAGTCATCAAA
GGCTCCTTCCCGGTGAGATTGCAGTTTAGCAGAAGTCTTTGCAGTTGAAAAAAGTCAGAG
CGTGGGTAGTAGAACTTCAAAGAGGGCTCCAGGGTCCTCTCTGGCACAGCTCAGCTGTCA
TCACTCCTGTGGGACCGAGTACACTTGTGGGTCCGTGTGACTCCTGGTTGCGGGGTGCCA
TCTCTTGCACCAGAGGCTGCAGTTCTCACATTTTGTGGGAGCTGTTTTTCATTTGTGTTT
TTAAGTTTGATTCATTGATGTGCGATAAACACATATATATAAGTGTCAGCCGATGCAGTC
ATGGTGGTGATCCTGCCAACTGGGAGCCTCGCCAAGATTCTCTGGGACAGTTCTAGTGTC
ATATGTGTGTGACCAGGACAGCCTGTGTCTGGCCATCTGCTCTGACCCAAGCCAGAAAGC
AGACCCCTGGGGACTTTGGAGAATCACCCTCTGGGGCGTGTGCATGGAGCTTTGGCGTCG
GCACTGAGTTCTCTGTGCCCTTTTCTAGAAAGGTCTATCAAGGTATGAAATAATCAGCAG
GTGTCTGTTTGGAGTAAAGAGAATTGGTTTCTTTAGGCAGATGCAAAACAGACCCCTCCG
CAACCTCTGAAACCTGTCAGTTAGGGTTAGCACTGCCACACCTCCCCCAGGTAAACAGTG
GTGTGCTTTCTGCAACGGACCGGAGATCGAGATCAGTCAGAACTCACCGCTGAGGAGTTT
CT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTACCATGATGAGTGAGGTGTGTGTTAGCAAACCCAGCCCCAGGGCCTCCTTCCCTAGCT
CCTGTCCTGGGGAAAGAGAGGCTGGGCCTGAGGCGGTCATCCACACAGAGAGTCATCAAA
GGCTCCTTCCCGGTGAGATTGCAGTTTAGCAGAAGTCTTTGCAGTTGAAAAAAGTCAGAG
CGTGGGTAGTAGAACTTCAAAGAGGGCTCCAGGGTCCTCTCTGGCACAGCTCAGCTGTCA
TCACTCCTGTGGGACCGAGTACACTTGTGGGTCCGTGTGACTCCTGGTTGCGGGGTGCCA
TCTCTTGCACCAGAGGCTGCAGTTCTCACATTTTGTGGGAGCTGTTTTTCATTTGTGTTT
TTAAGTTTGATTCATTGATGTGCGATAAACACATATATATAAGTGTCAGCCGATGCAGTC
ATGGTGGTGATCCTGCCAACTGGGAGCCTCGCCAAGATTCTCTGGGACAGTTCTAGTGTC
ATATGTGTGTGACCAGGACAGCCTGTGTCTGGCCATCTGCTCTGACCCAAGCCAGAAAGC
AGACCCCTGGGGACTTTGGAGAATCACCCTCTGGGGCGTGTGCATGGAGCTTTGGCGTCG
GCACTGAGTTCTCTGTGCCCTTTTCTAGAAAGGTCTATCAAGGTATGAAATAATCAGCAG
GTGTCTGTTTGGAGTAAAGAGAATTGGTTTCTTTAGGCAGATGCAAAACAGACCCCTCCG
CAACCTCTGAAACCTGTCAGTTAGGGTTAGCACTGCCACACCTCCCCCAGGTAAACAGTG
GTGTGCTTTCTGCAACGGACCGGAGATCGAGATCAGTCAGAACTCACCGCTGAGGAGTTT
CT

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               237-405, + strand, RNAz p=0.943846

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               237-405, + strand, RNAz p=0.943846

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               59-842, gnl|bosTau2|chr7 (5608334-5607536)
               

               
               59-842, gnl|Hg17|chr19 (16344472-16343620)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               59-842, gnl|bosTau2|chr7 (5608334-5607536)
               

               
               59-842, gnl|Hg17|chr19 (16344472-16343620)

	59-842, gnl\|bosTau2\|chr7 (5608334-5607536)
	59-842, gnl\|Hg17\|chr19 (16344472-16343620)