Non-Coding RNA Search

Utr1-UTR010057D02

Sequence:


               
               TTTTTTGCTGATAATCCTCCGGTCCTTCCTGGACAGATCTGACAAGTAAAGGAACATCTG
GGATGCCAAATAAAAAGAGGGTACAAAACTTGAATTTCTGGCATAAGATACAAAGGAGAG
CTTTACACACTTCCATCCCTTTTTAGGGATTAAAATTCTTTAACAAGACTTTTCTGTTAA
TTTTGCTTTTCCCAGGATAATTTTAAAAATCCTAGCATTTCCTTTGGCTTTAAGGAAATT
GGCTGATGTGCACAGTCTAATGTGGGCAACCTACTGGGAGTCTCAAAAGCTTCTTAAAGC
ATGATAATTGATTTTCCAGTTTGCAGAGATGTCCACTGTGTGGTTTTGAATTACACAGCT
GAAACTGTGCGATTCACCTTCATATCTCTTACTGGGTACAACACAATGTGAAAAACAGAA
GCCGGAAAGAGATGAGCTTTACTCCTGAAGGATTTCATGTACAGAACCAGGGAGTTTTTC
CAAGTACACCCTTCAGATGAATCTTTTCCATCTGGCTGGATCCCTCCCCCTCCCCAACCA
CAATCAGATGCTTAAGACCCTGAGAGCATTTTAATGCTCTGTTCTTGTAATTCCTCTCAC
TTTCTCCCTCCAGAAAGAAGAGTTAATTAACCATGTATGGCTTTTACTATATAGTTAAGT
TTTATATAAAAAGCCCCCCTGGGAAATTTGACTTCCCCTGAAGGAAAAATAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTTTTGCTGATAATCCTCCGGTCCTTCCTGGACAGATCTGACAAGTAAAGGAACATCTG
GGATGCCAAATAAAAAGAGGGTACAAAACTTGAATTTCTGGCATAAGATACAAAGGAGAG
CTTTACACACTTCCATCCCTTTTTAGGGATTAAAATTCTTTAACAAGACTTTTCTGTTAA
TTTTGCTTTTCCCAGGATAATTTTAAAAATCCTAGCATTTCCTTTGGCTTTAAGGAAATT
GGCTGATGTGCACAGTCTAATGTGGGCAACCTACTGGGAGTCTCAAAAGCTTCTTAAAGC
ATGATAATTGATTTTCCAGTTTGCAGAGATGTCCACTGTGTGGTTTTGAATTACACAGCT
GAAACTGTGCGATTCACCTTCATATCTCTTACTGGGTACAACACAATGTGAAAAACAGAA
GCCGGAAAGAGATGAGCTTTACTCCTGAAGGATTTCATGTACAGAACCAGGGAGTTTTTC
CAAGTACACCCTTCAGATGAATCTTTTCCATCTGGCTGGATCCCTCCCCCTCCCCAACCA
CAATCAGATGCTTAAGACCCTGAGAGCATTTTAATGCTCTGTTCTTGTAATTCCTCTCAC
TTTCTCCCTCCAGAAAGAAGAGTTAATTAACCATGTATGGCTTTTACTATATAGTTAAGT
TTTATATAAAAAGCCCCCCTGGGAAATTTGACTTCCCCTGAAGGAAAAATAAAA

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               166-283, - strand, RNAz p=0.56214

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               166-283, - strand, RNAz p=0.56214

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               2-713, gnl|bosTau2|chr1 (34845995-34846706)
               

               
               2-713, gnl|Hg17|chr3 (114805552-114804773)
               

               
               2-713, gnl|Mm7|chr16 (44044575-44045240)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-713, gnl|bosTau2|chr1 (34845995-34846706)
               

               
               2-713, gnl|Hg17|chr3 (114805552-114804773)
               

               
               2-713, gnl|Mm7|chr16 (44044575-44045240)

	2-713, gnl\|bosTau2\|chr1 (34845995-34846706)
	2-713, gnl\|Hg17\|chr3 (114805552-114804773)
	2-713, gnl\|Mm7\|chr16 (44044575-44045240)