Non-Coding RNA Search

Utr1-UTR010058B04

Sequence:


               
               AAAATAggagttcctggcatggcgcagtagttaacgaacctggctattatccatgaggat
gcaggctcagtccctggcctcactcagtggggtaaggatccagtgttgctgtgagctgtg
gtgtaggttgcagactcagctcagatcctgcgttgctgtggctatggtgtaggccggcag
ctacagctccgattcgacccctagcccgggaacctccatatgccatgggtgcggccctaa
aaagaccaaaataaaataaaaTAGAGTCCAAGGTGATAAGAACAAAAGGGAACAAAGAGA
AATATTTCATAATAATAACCTACTGAGAAAATAGAGCAGCTGTGAACTTTTATGCTGTTA
ATGACAGAGCCTTGAAGGATACATGAACTAAGAAAAAGAATTCTCATTGTTCACCATTTT
AAAAAAATGAAATTATGGAGACACATTCACTAAAAAATAAAAATGAAAGAGAAAAAGACC
TGGAAATTGAGAACCAAATAATAGTGACTGAAGGCATGTATGCAAGGAGAGGAATCTATA
CATGTAGAAATAATCTATACACAGACACACTTCATAACACCTCCTAAGTTAATACAATCA
AGACTTAAATTTGAACATCTAGTCAAAGATGACAGATTTAAAAACCCCCAAACTCCAGTA
AAGAGCTGTGATGGTGTGTTTTTGAAGGTGTGAACACACCTAGATGGAGAGGGCAGGAGG
GAGCCAGCTGCAGGAGCattctggatactggaaagcagatgggccagaggtggctgattt
agcagattcgagagagctgaatgccatgccagcagCAGAGGGGACACAAAAATGCATCTG
GTCTGCAAATCCCCTTCTCCCCCACCCCTGGCAAACACCTGGGCATT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAAATAggagttcctggcatggcgcagtagttaacgaacctggctattatccatgaggat
gcaggctcagtccctggcctcactcagtggggtaaggatccagtgttgctgtgagctgtg
gtgtaggttgcagactcagctcagatcctgcgttgctgtggctatggtgtaggccggcag
ctacagctccgattcgacccctagcccgggaacctccatatgccatgggtgcggccctaa
aaagaccaaaataaaataaaaTAGAGTCCAAGGTGATAAGAACAAAAGGGAACAAAGAGA
AATATTTCATAATAATAACCTACTGAGAAAATAGAGCAGCTGTGAACTTTTATGCTGTTA
ATGACAGAGCCTTGAAGGATACATGAACTAAGAAAAAGAATTCTCATTGTTCACCATTTT
AAAAAAATGAAATTATGGAGACACATTCACTAAAAAATAAAAATGAAAGAGAAAAAGACC
TGGAAATTGAGAACCAAATAATAGTGACTGAAGGCATGTATGCAAGGAGAGGAATCTATA
CATGTAGAAATAATCTATACACAGACACACTTCATAACACCTCCTAAGTTAATACAATCA
AGACTTAAATTTGAACATCTAGTCAAAGATGACAGATTTAAAAACCCCCAAACTCCAGTA
AAGAGCTGTGATGGTGTGTTTTTGAAGGTGTGAACACACCTAGATGGAGAGGGCAGGAGG
GAGCCAGCTGCAGGAGCattctggatactggaaagcagatgggccagaggtggctgattt
agcagattcgagagagctgaatgccatgccagcagCAGAGGGGACACAAAAATGCATCTG
GTCTGCAAATCCCCTTCTCCCCCACCCCTGGCAAACACCTGGGCATT

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               471-580, + strand, RNAz p=0.586544

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               471-580, + strand, RNAz p=0.586544

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               253-713, gnl|bosTau2|chr28 (29486260-29486719)
               

               
               253-713, gnl|Hg17|chr10 (49456911-49456411)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               253-713, gnl|bosTau2|chr28 (29486260-29486719)
               

               
               253-713, gnl|Hg17|chr10 (49456911-49456411)

	253-713, gnl\|bosTau2\|chr28 (29486260-29486719)
	253-713, gnl\|Hg17\|chr10 (49456911-49456411)