Non-Coding RNA Search

Utr1-UTR010061B02

Sequence:


               
               ATCTCAGACACCACCAAGCTGCTGAAGCCCAGCCTGGTGTTCTCCTTTGCCATTGCGGCG
GGTGTCTGCGGCCTCACCCAGATAACACAGTACCGGAGCCACCCTGTGGATGTGTACGCC
GGCTTCCTCATTGGTGCTGGCATCGCTGCCTACCTGGCTTGCCATGCAGTGGGCAACTTC
CAGGCCCCACCCTCGGAGAAGCCAGTAGCCCCGGCGCCTGCCAAGGATGCACTGCGGGCA
CTGACCCAGCGGGGCCACGACTCGGTGTACCAGCAGAACAAGTCAGTGAGCACAGATGAG
CTGGGCCCGCCTGGGCGGCTGGAGGGTGTACCCCGGCCCGTGGCCCGTGACAAGACCTCA
CTGGGCAGCCTGAAGCGGGCCAGTGTGGACGTGGACCTGCTGGCCCCTCGCAGCCCCATG
GGCAAAGAAAACATGGTGACCTTCAGCCACACGCTGCCCCGTGTCAGCACACCCTCGCTG
GACGACCCAGCCCGCCGCCACATGACCATCCACGTGCCCCTCGATGCCTCACGCTCCAAA
CAGCTCATCAGCGAGTGGAAGCAGAAGTCACTGGAGGGCCGTGGCTTGGGGCTTCCAGAT
GAGGCCAGCCCTGGGCACCTCCGACCACCCGCTGAGCCCATGGCAGAGGAGGAGGAGGAA
GAAGAAGAGGAGGACGAGGAGGAGGATGAGGAGGAGGAGGGAGAGGAAGGCGGTCCGGCC
CCACCTTCACTCTACCCTACTGTCCAGGCCCGGCCAGGGGCTTGGGCCCAGGGTCATTCT
CCCTCCAAGGGCTGGTCCCACAGCCACTGGTGCACATC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATCTCAGACACCACCAAGCTGCTGAAGCCCAGCCTGGTGTTCTCCTTTGCCATTGCGGCG
GGTGTCTGCGGCCTCACCCAGATAACACAGTACCGGAGCCACCCTGTGGATGTGTACGCC
GGCTTCCTCATTGGTGCTGGCATCGCTGCCTACCTGGCTTGCCATGCAGTGGGCAACTTC
CAGGCCCCACCCTCGGAGAAGCCAGTAGCCCCGGCGCCTGCCAAGGATGCACTGCGGGCA
CTGACCCAGCGGGGCCACGACTCGGTGTACCAGCAGAACAAGTCAGTGAGCACAGATGAG
CTGGGCCCGCCTGGGCGGCTGGAGGGTGTACCCCGGCCCGTGGCCCGTGACAAGACCTCA
CTGGGCAGCCTGAAGCGGGCCAGTGTGGACGTGGACCTGCTGGCCCCTCGCAGCCCCATG
GGCAAAGAAAACATGGTGACCTTCAGCCACACGCTGCCCCGTGTCAGCACACCCTCGCTG
GACGACCCAGCCCGCCGCCACATGACCATCCACGTGCCCCTCGATGCCTCACGCTCCAAA
CAGCTCATCAGCGAGTGGAAGCAGAAGTCACTGGAGGGCCGTGGCTTGGGGCTTCCAGAT
GAGGCCAGCCCTGGGCACCTCCGACCACCCGCTGAGCCCATGGCAGAGGAGGAGGAGGAA
GAAGAAGAGGAGGACGAGGAGGAGGATGAGGAGGAGGAGGGAGAGGAAGGCGGTCCGGCC
CCACCTTCACTCTACCCTACTGTCCAGGCCCGGCCAGGGGCTTGGGCCCAGGGTCATTCT
CCCTCCAAGGGCTGGTCCCACAGCCACTGGTGCACATC

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|15214427|gb|AAH12339.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|15214427|gb|AAH12339.1|

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               701-818, - strand, RNAz p=0.948498

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               701-818, - strand, RNAz p=0.948498

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               439-818, gnl|bosTau2|chr7 (10605244-10605615)
               

               
               439-818, gnl|Hg17|chr19 (764613-764239)
               

               
               439-818, gnl|Mm7|chr10 (79645916-79645545)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               439-818, gnl|bosTau2|chr7 (10605244-10605615)
               

               
               439-818, gnl|Hg17|chr19 (764613-764239)
               

               
               439-818, gnl|Mm7|chr10 (79645916-79645545)

	439-818, gnl\|bosTau2\|chr7 (10605244-10605615)
	439-818, gnl\|Hg17\|chr19 (764613-764239)
	439-818, gnl\|Mm7\|chr10 (79645916-79645545)